| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3160 |
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| Symbol | |
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| ID | 5386348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3558462 |
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| End bp | 3559499 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866167 |
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| Product | putative thiamine biosynthesis lipoprotein apbE |
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| Protein accession | YP_001402120 |
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| Protein GI | 153950199 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGGGG CGATTGTGCG CAAGTATATA ACACGTTGTT TAATGTTGGT GATAGGGGGC
CTGCTGCTGA GTGGCTGTGG CCCTGAGCAG GTCAGCCTTG AAGGCAAAAC GATGGGAACC
TCCTATTCTA TTAAGTATGT GAGTGATTCA TCAACGGCTG CCCCAGAGAC GTTACAACAG
GAAATAGACC TCATACTTGA AGAGGTTAAT GACCAGATGT CGACTTATCG GCCACATTCT
GAATTGAGCC GCTTTAATCA AAGCCGAGAG GTGAATCAAC CTTTCCCTGT ATCGGCGGCG
ACGGCCAAAG TAGTACAAGA GGCTATACGT ATTAACCGTC TGACCGATGG TGCCTTAGAT
GTGACTGTGG GGCCGTTAGT CAATTTATGG GGTTTTGGCC CTGAAGGGCG CCCGGATACT
GTACCTACCG AGGATGAAAT CACTCGGCGT CGTGCGTGGG TAGGGATTGA TAAGCTGGCA
GTGGATAAGA ATGCATTAAT AAAACGTGTT CCTGAACTGT ATGTTGATCT CTCTTCTATC
GCCAAAGGCT ACGGCGTCGA TGTAGTAGCT GAATATCTGG AGGCGCAGAA TATCAAGGAT
TATATGGTTG ATATCGGGGG GGAAGTCCGT ACCCGTGGTA ACAATGGAGA AAATAAACCT
TGGCGTATCG CCATTGAAAA GCCAGTCGCG GGTTCTACAC AACGTGCCCA GGAAATTATT
GAACCAGGGC GGATGGCGGT AGCCACCTCT GGTGATTATC GTAATTATTT TGAGCAGGAC
GGGATCCGTT ATTCTCATAC TATTGATCCT GATACCGGGC GGCCTATTAA CCACCGGTTA
GTCTCTATCA CTGTTTTAGA CCCAAGCTGT ATGACTGCTG ATGGCCTCTC TACCGGGTTA
GGTGTCCTTG GGCCAGAGCG GGGAATGGCA TTAGCCAATT TATTGGGCAT CCCGGTCTTG
ATGATAATCA AAACAGATGA TGGGTTTGAA GAGCAGTATT CAGATGCATT TAAACCCTAT
CTACAAGTAA AACATTAG
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| Protein sequence | MVGAIVRKYI TRCLMLVIGG LLLSGCGPEQ VSLEGKTMGT SYSIKYVSDS STAAPETLQQ
EIDLILEEVN DQMSTYRPHS ELSRFNQSRE VNQPFPVSAA TAKVVQEAIR INRLTDGALD
VTVGPLVNLW GFGPEGRPDT VPTEDEITRR RAWVGIDKLA VDKNALIKRV PELYVDLSSI
AKGYGVDVVA EYLEAQNIKD YMVDIGGEVR TRGNNGENKP WRIAIEKPVA GSTQRAQEII
EPGRMAVATS GDYRNYFEQD GIRYSHTIDP DTGRPINHRL VSITVLDPSC MTADGLSTGL
GVLGPERGMA LANLLGIPVL MIIKTDDGFE EQYSDAFKPY LQVKH
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