Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3145 |
Symbol | |
ID | 5387774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3541117 |
End bp | 3541731 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640866152 |
Product | hypothetical protein |
Protein accession | YP_001402105 |
Protein GI | 153947871 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.725921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTCACA TTCTCTGGTC ACTGGATAGC ACGGTAAAAA ATCAAAACCA TGTCGTATCC TATGATCTCT CCGCTCAAAT ATTACAGGTT GTCATGCAGG CCGCAGCAGA TAAAAAACTC ACTAATATTG AGATACAACA AGGGCTGGCT GAATCATTGC CTTTTGCTGA TCAAAGCTTT GATATTGTTA TCAGCCGTTA TTCTGCACAC CATTGGCACG ATGTTGGGAA AGCTTTACGT GAAGTTAAGC GGGTATTACG GCCCGGTGGA AAAGTCATCT TCATGGATGT GGTTTCTCCC GGACATCCGG TATTGGATAT CTATTTGCAA ACAGTAGAAG TCTTACGTGA TACCTCGCAT GTGCGAAATT ACTCTCCTGG AGAATGGCTA TCTTTATTTA CCGAGGGTGG GTTAGTAATA AATGAAGTAA CTTCTGACCG CTTGTATTTG GAGTTCAGCA GTTGGATTGC CAGAATGCGT ACACCTGTAC ATTTTGCTAC GGCTATTCGC GAGTTACAAA AGTTAGCATC TGACGGTGTC ATTAATCACT ATGCTATTCA GGCTGATGGT TCCTTTACCA GCGATATCAT GATGATTGTT GCAGTAAGAG ACTAA
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Protein sequence | MLHILWSLDS TVKNQNHVVS YDLSAQILQV VMQAAADKKL TNIEIQQGLA ESLPFADQSF DIVISRYSAH HWHDVGKALR EVKRVLRPGG KVIFMDVVSP GHPVLDIYLQ TVEVLRDTSH VRNYSPGEWL SLFTEGGLVI NEVTSDRLYL EFSSWIARMR TPVHFATAIR ELQKLASDGV INHYAIQADG SFTSDIMMIV AVRD
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