| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3144 |
|---|
| Symbol | |
|---|
| ID | 5388126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3539829 |
|---|
| End bp | 3540386 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640866151 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_001402104 |
|---|
| Protein GI | 153948394 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3963] Phospholipid N-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.875081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACA TTGTCCGGCG TAATTTTAAA AGTCAGTTTT CCTATTTGCA GCGTTTTATT
GCCTCACCTC GTACCGTTGG TTCATTGGTC CCCTCGTCGC CTTGGTTATG TCAGGCGATG
CTAAACCAGA TAGATTGGAC ACAAAATCTT AATATTGCTG AATTAGGTGC GGCTGATGGT
GTGCTGACTA AGCGTATTCT GTCGCATATG TCAGCTAATT CGAGCTTACA AGCGTATGAG
ATTCAACCTC ATTTTGTACA TGCATTGCAC CAGCTAAAAG ATCCGCGTTT ACAGATCGCA
GATCGTTCTG CGGAGCAGTT GGATCAAGAG TACGATGTTG TTTTTTGTTG TTTACCTTTG
CTGTCTATCC CAACCAAGAT CAGTATCAGA ATATTACAGC AAACTCAGCA ACGCCTACGT
GCACGCAATG GAGTCTTAGT GCTGTTTCAA TACAGCCATC TATCAGAGTC ATTGCTATCT
CGTTATTTTA ATTGGAAAAA AATACGGGTC GTGCGTAATT TTCCTCCTGC GCTGGTTTAT
ATTTGTCACC CCAATTAA
|
|---|
| Protein sequence | MLNIVRRNFK SQFSYLQRFI ASPRTVGSLV PSSPWLCQAM LNQIDWTQNL NIAELGAADG
VLTKRILSHM SANSSLQAYE IQPHFVHALH QLKDPRLQIA DRSAEQLDQE YDVVFCCLPL
LSIPTKISIR ILQQTQQRLR ARNGVLVLFQ YSHLSESLLS RYFNWKKIRV VRNFPPALVY
ICHPN
|
|---|
| |