| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3132 |
|---|
| Symbol | proY |
|---|
| ID | 5385791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3523859 |
|---|
| End bp | 3525253 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640866139 |
|---|
| Product | putative proline-specific permease |
|---|
| Protein accession | YP_001402092 |
|---|
| Protein GI | 153950351 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAC CAGTTAAAAA TAAGCTTAAA CGTGGCCTGA CGACACGTCA TATTCGTTTT
ATTGCATTGG GTTCAGCGAT AGGGACTGGC CTATTCTATG GTTCGGCTGA TGCGATAAGA
ATGGCCGGGC CAAGCGTGTT GTTGGCATAC CTGATTGGTG GTGTGGTGGC CTTTGTCATC
ATGCGTGCTT TGGGTGAGAT GTCGGTCAAT AACCCACAAG CCAGCTCTTT CTCTCGTTAT
GCGCAAGATT ATCTTGGGCC GATGGCAGGT TATATCACCG GCTGGACGTA TTGTTTTGAG
ATCTTGATTG TGGCTATTGC TGATGTGACA GCTTTCGGTA TCTATATGGG GCTCTGGTTC
CCAGATGTCG CTCATTGGGT ATGGGTGCTG AGTGTTGTCT TGATCATCGG CGCGGTCAAT
ATGATGAGTG TGAAAGTCTT CGGTGAGCTT GAGTTCTGGT TCTCGTTTTT CAAAGTTGCC
ACCATTATCA TCATGATTTT GGCCGGTATC GGTATCATTG TTTGGGGTAT TGGTAACGGT
GGCCAGCCAA CGGGTATTCA TAATTTATGG ACTAACGGTG GCTTCTTCAG TAATGGCTTT
GTTGGCATGA TCCTGTCATT ACAATTGGTG ATGTTTGCCT ATGGCGGTAT TGAGATTATT
GGTATTACTG CCGGTGAAGC CGAGGATCCG AAAAAATCGA TTCCGAAAGC AATCAACTCA
GTACCATGGC GTATTTTAGT CTTTTACGTC GGGACCCTGT TTGTGATTAT GTCCATTTAC
CCATGGAATC AAGTGGGCAC GAACGGTAGT CCGTTCGTTC TGACCTTCCA GCATATGGGG
ATCACCATTG CTGCCGGTAT TTTGAACTTT GTGGTTATCA CCGCTTCTGT ATCTGCAATT
AACAGCGATG TGTTTGGTGT CGGGCGTATG CTGAATGGGA TGGCAGAACA AGGCCATGCA
CCAAAAGCTT TTACTGCTAT TTCTAAACGC GGTGTGCCGT GGGTCACGGT GCTGGTGATG
ATGTGTGCCA TGCTAATTGC GGTTTATCTG AACTACATCA TGCCGGAAAA TGTTTTCTTG
GTTATTGCGT CATTAGCGAC GTTTGCTACT GTCTGGGTCT GGATCATGAT CCTATTCTCT
CAGATTGCTT TCCGTCGTTC ACTGAGTAAA GATCAGGTTA AAGCACTGGA TTTCCCACTG
CGTGGTGGCA CCTTTACTTC AGTGCTAGCA ATCATTTTCC TGGTATTTAT TATCGGTCTT
ATTGGTTGGT TCCCTACGAC TCGAATCTCA CTGTATGTCG GATTAGTGTG GATCGTGCTG
TTGCTAGTGG GGTATTACTT TAAGGTCAAG TATCAGAAAA AACAGGCGAC GCTGATTAAA
AACACAGTTC AATAA
|
|---|
| Protein sequence | MELPVKNKLK RGLTTRHIRF IALGSAIGTG LFYGSADAIR MAGPSVLLAY LIGGVVAFVI
MRALGEMSVN NPQASSFSRY AQDYLGPMAG YITGWTYCFE ILIVAIADVT AFGIYMGLWF
PDVAHWVWVL SVVLIIGAVN MMSVKVFGEL EFWFSFFKVA TIIIMILAGI GIIVWGIGNG
GQPTGIHNLW TNGGFFSNGF VGMILSLQLV MFAYGGIEII GITAGEAEDP KKSIPKAINS
VPWRILVFYV GTLFVIMSIY PWNQVGTNGS PFVLTFQHMG ITIAAGILNF VVITASVSAI
NSDVFGVGRM LNGMAEQGHA PKAFTAISKR GVPWVTVLVM MCAMLIAVYL NYIMPENVFL
VIASLATFAT VWVWIMILFS QIAFRRSLSK DQVKALDFPL RGGTFTSVLA IIFLVFIIGL
IGWFPTTRIS LYVGLVWIVL LLVGYYFKVK YQKKQATLIK NTVQ
|
|---|
| |