| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3111 |
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| Symbol | ispA |
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| ID | 5386435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3501016 |
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| End bp | 3501936 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640866118 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_001402071 |
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| Protein GI | 153948033 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGATA CCCATGCACC TGTTGATTTT AAACAACAAC TTGCCGCTCA TCAGCAGCGA
GTCAATCAGG CTCTGCTGGA TTTCATTGCT CCCCTGCCGT TTGGCAATAG CAATTTAATC
GAGGCCATGC GCTATGGTGC GGTAATCGGG GGTAAGCGTC TCCGCCCCTA TCTGGTCTAT
GCCACAGGGC AAATGTTTGG TTTGTCACTC GCCAACTTAG ACGCCCCGGC GGCGGCAATT
GAATGTATTC ATGCCTATTC ATTAATACAT GATGATCTGC CCGCCATGGA CGATGATGAT
TTACGCCGTG GGCAGCCGAC TTGCCACGTT AAGTTTGGCG AGGCCCACGC TATTTTGGCC
GGTGATGCAC TGCAAACGCT GGCCTTTTCT ATTTTGGCTG AAGCCCCCAT GCCCGATGTC
GCTGATAAAG ATCGCCTATC GATGATTATC GAGTTGGCTC AAGCTAGTGG GGCTGCGGGG
ATGTGTGCGG GTCAGGCGCT AGATCTGGAA GCAGAAACTC GCCCTGTTTT ATTAGGTGAC
CTTGAGCAAA TCCACCGTCA TAAAACCGGT GCGTTGATTC GTGCGGCAGT TCGCCTTGGC
GCCCTGGCAG CCGGTGAAGC TGGCCGTAAA ACATTATTGT CACTCGATCG TTACGCCGAG
GCCATCGGTT TAGCCTTTCA AGTCCAGGAC GATATTTTAG ACGTCATTGG CGACACAGCT
ACAATTGGTA AACGTCAAGG CTCAGACCAA CAACTAGGCA AAAGTACTTA TCCGGCGCTA
CTTGGTCTGG ATTGTGCCCA AACAAAAGCG ATGGATCTTT ATCAGGAGGC ACTAGAGGCC
TTGGATGAAT TGGCAAAACA GTCCTATAAC ACGGATTCAT TGCAGGCATT AGCTCGTTTC
ATTATTGAGC GTAATAATTA A
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| Protein sequence | MSDTHAPVDF KQQLAAHQQR VNQALLDFIA PLPFGNSNLI EAMRYGAVIG GKRLRPYLVY
ATGQMFGLSL ANLDAPAAAI ECIHAYSLIH DDLPAMDDDD LRRGQPTCHV KFGEAHAILA
GDALQTLAFS ILAEAPMPDV ADKDRLSMII ELAQASGAAG MCAGQALDLE AETRPVLLGD
LEQIHRHKTG ALIRAAVRLG ALAAGEAGRK TLLSLDRYAE AIGLAFQVQD DILDVIGDTA
TIGKRQGSDQ QLGKSTYPAL LGLDCAQTKA MDLYQEALEA LDELAKQSYN TDSLQALARF
IIERNN
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