| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3077 |
|---|
| Symbol | amt |
|---|
| ID | 5385615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3463478 |
|---|
| End bp | 3464770 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640866084 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_001402037 |
|---|
| Protein GI | 153948187 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.822444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AACTTTTATC CGTGTTGGGC CTGGGTACGG TAGCGCTGTT ACCTTCTTGG
GCAATGGCGG CGGCACCGGC AGTCGCTGAC AAAGCAGATA ATGCTTTTAT GATGATTTGC
ACTGCGTTAG TACTGTTTAT GACGATACCC GGTATTGCCC TGTTCTACGG TGGCCTGTTG
CGCTCCAAAA ACGTATTGTC AATGATGACT CAGGTCATGG TGAGTTTTGC GCTGGTATGT
GTTTTGTGGA TTCTCTACGG CTACAGCCTG GCGTTTAGTG CGGGTAATGC GTTCTTCGGC
AGTTTTGATA TGGCCATGCT GAAAGGTATT GAGCTGACTA GCCTGAGTGG CTCGTTTTAT
CAATATATTC ATGTCGTGTT CCAAGCCTCA TTTGCCTGTA TCACCGTCGC TCTGATTGTG
GGTTCATTCG CAGAGCGTAT TCGTTTCTCA GCAGTATTAA TTTTCGCCGC GCTGTGGTTC
ACCTTCTCTT ACCTACCAAT AGCGCACATG GTATGGGGTG GTGGTTTCCT GGCAATGGAC
GGAGCGCTGG ATTTTGCTGG TGGTACAGTG GTGCACATTA ACGCCGCTGT TGCTGGTTTG
GTCGGGGCTT ATCTGTTGGG TAAACGTGCC GGATTCGGTA AAGAGGCCTT CAAACCCCAT
AACTTACCGA TGGTCTTTAC CGGTACGGCG ATTCTGTATA TTGGCTGGTT TGGCTTCAAT
GCCGGTTCAG CCAGTGCTGC GAACGAAATT GCAGCGCTAG CGTTCTTGAA TACCGTCGTT
GCAACGGCGG GCGCCATCCT CTCGTGGGTA TTTGCTGAGT GGGCTTTACG AGGTAAACCT
TCGCTGTTGG GGGCATGTTC CGGTTGTATC GCAGGCTTGG TTGCGATTAC TCCGGCAGCA
GGTACGGTAG GGGTTGGCGG TGCATTGATT ATCGGTTTGG TTGGTGGTGT TGCTGGCCTG
TGGGGGGTCG TGCTACTGAA AAAATGGCTG CGGGTCGATG ATACCTGTGA TGTCTTCGGT
GTTCATGGTG TGTGTGGCAT CGTCGGTTGT ATTCTGACGG GTGTCTTCAC CTCGGCATCG
CTGGGCGGCA CTGGTTATGC TGCTGGCGTA ACCATGGGGC ATCAGGTCGG CGTTCAGTTA
TTCAGTGTTG GTGTGACTGT TGTTTGGTCG GGTGTTGTTG CCTTCGTTGC CTTTAAAATT
GCGGGCTTGA TTGTGGGCCT ACGGGTACCC GAAGAGCAAG AGCGTGAAGG TCTGGATGTT
AACAGTCACG GTGAAAACGC ATATAATCAA TAA
|
|---|
| Protein sequence | MMKKLLSVLG LGTVALLPSW AMAAAPAVAD KADNAFMMIC TALVLFMTIP GIALFYGGLL
RSKNVLSMMT QVMVSFALVC VLWILYGYSL AFSAGNAFFG SFDMAMLKGI ELTSLSGSFY
QYIHVVFQAS FACITVALIV GSFAERIRFS AVLIFAALWF TFSYLPIAHM VWGGGFLAMD
GALDFAGGTV VHINAAVAGL VGAYLLGKRA GFGKEAFKPH NLPMVFTGTA ILYIGWFGFN
AGSASAANEI AALAFLNTVV ATAGAILSWV FAEWALRGKP SLLGACSGCI AGLVAITPAA
GTVGVGGALI IGLVGGVAGL WGVVLLKKWL RVDDTCDVFG VHGVCGIVGC ILTGVFTSAS
LGGTGYAAGV TMGHQVGVQL FSVGVTVVWS GVVAFVAFKI AGLIVGLRVP EEQEREGLDV
NSHGENAYNQ
|
|---|
| |