Gene YpsIP31758_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3059 
SymboldnaX 
ID5385773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3443140 
End bp3445116 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content52% 
IMG OID640866065 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_001402019 
Protein GI153949412 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATC AGGTCCTTGC CCGTAAGTGG CGCCCTCAAA CGTTCGCCGA CGTCGTTGGT 
CAGGAACATG TCCTGACAGC GCTGGCTAAT GGCCTTTCAT TAGGGCGAAT TCATCACGCC
TATTTATTTT CAGGTACTCG CGGTGTGGGT AAAACCTCGA TAGCCAGATT GCTGGCTAAA
GGCCTCAACT GCGAAACCGG TATTACTGCG ACCCCTTGCG GTACCTGCGC CAATTGCCAG
GAGATTGAGC AGGGGCGTTT TGTTGATCTG ATCGAGATAG ACGCCGCCTC CCGGACTAAG
GTTGAGGACA CCCGAGAGCT GTTGGATAAT GTCCAATATG CCCCTGCCCG TGGTCGCTTC
AAGGTCTATT TGATCGATGA AGTGCATATG CTATCGCGGC ACAGTTTCAA CGCGTTGCTG
AAAACACTTG AAGAGCCGCC TGCACATGTG AAATTTCTGT TGGCGACCAC TGATCCACAA
AAGTTACCTG TTACGATCCT TTCCCGATGT TTGCAATTCC ACCTAAAAGC ATTGGATGTT
GAGCAGATCC GTGCACAACT TGAAAAAGTG TTGCTGGCTG AACAAATCAC GAGTGATGCC
AGAGCCTTGC AATTACTGGC CCGAGCGGCT GATGGCAGCA TGCGAGATGC GCTAAGCTTA
ACCGATCAGG CTGTATCAAT GGGGCAAGGG CAGGTCACGA CAGTAACAGT TAGCCAAATG
CTGGGAACGC TGGATGACGA ACAGCCTCTT GCCATTATTG AGGCGTTGGT CAGTGCTGAT
GGTGCCCGGG TTATGGCTCA GATAGAACAG GCGGCATCGC GGGGTGTCGA CTGGGAAAAC
CTGTTGGTGG AAAGCTTAAG CCTGCTGCAC AAAATTGCGA TGGTACAGTT GTTGCCTTCG
ATGCTGGATA ACCATTATGC AGCTATTGAA CCCCGTTTAC GGGAACTGGC CCGCACATTA
CCGCCTGCTG ATATTCAGCT GTATTATCAA ACCTTGCTGG TAGGCCGCAA AGAACTGGCT
TATGCGCCGG ATCGCCGTAT GGGGGTTGAA ATGACCTTAT TACGCGCGCT GGCTTTTCAT
CCTAAAGCCA TCATTGCGGA GCCCCAAATA GCGCATGTTG CCGCGCCATC TGCAATAGCC
GATAACGCTG TGCCCACCTC TCAGGGGGGG CAACATAGGC AGGAACCCGC ATCAGTACCG
CCGAGTTCCC ATCAAGAGGC TCCGCCGTTA GGTGCTGTAG CGTCCAGCGT CCAACTTCCG
GAATCGACAG CGCAATTGCT TCAGGCGCGT ACGCAGTTAC TGCGACAGTC GGGGACGACC
ACAACAAAAA AGAATGAGCC GGCGGCGCCA GGAAAAGCGC GGCCGGCAAA CTCAGCACTG
GAGCGTTTAG CTTCGGTGAC TGAGCGTAGC CAGCAGCGCC TGGCAGCCAA AACAACGGAA
GAGAAGAAAC CAGCGAAAAA AGAAGCTTAT CGCTGGACCG CGAAAAATCA ACCTGAGGTA
GCGGCTGAAC CTATCGCTAC GCCTAAAGCG TTGCGTTCTG CGCTAGAACA TGAAAAAACA
CCAGAGCTTT CCGCTAAATT GGCTGAGGAG GCGATCGCCC GTGATCCTTG GGCTGCAGAG
GTCAATCAGT TACAGCTCCC TAAATTAGTC CAGCAGCTTG CACTGAATGC ATTTAAACAA
GAAATAGAAC CGGGTAATAT TTGCCTGCAT CTGCGTTCTG CTCAACGTCA TTTGAATTCA
GCGTCAGCAC AAAAAGCGCT GAGTGATGCA TTGAGTGAAT TACACGGTAA CGCGGTGACA
CTGAGCGTTA TTGAAGATGA CAATCCGGCG GAACGTACCC CGCTGGAATG GCGGCAGGCC
ATCTATGAAG AAAAGCTGGC ACAAGCACGT CAGTCAATTA TTGCGGATAA TAATATTCAG
ACACTGCGTC GATTCTTCGA TGCCGAGCTG GATGAAGACA GTATCCGACC AATTTAA
 
Protein sequence
MSYQVLARKW RPQTFADVVG QEHVLTALAN GLSLGRIHHA YLFSGTRGVG KTSIARLLAK 
GLNCETGITA TPCGTCANCQ EIEQGRFVDL IEIDAASRTK VEDTRELLDN VQYAPARGRF
KVYLIDEVHM LSRHSFNALL KTLEEPPAHV KFLLATTDPQ KLPVTILSRC LQFHLKALDV
EQIRAQLEKV LLAEQITSDA RALQLLARAA DGSMRDALSL TDQAVSMGQG QVTTVTVSQM
LGTLDDEQPL AIIEALVSAD GARVMAQIEQ AASRGVDWEN LLVESLSLLH KIAMVQLLPS
MLDNHYAAIE PRLRELARTL PPADIQLYYQ TLLVGRKELA YAPDRRMGVE MTLLRALAFH
PKAIIAEPQI AHVAAPSAIA DNAVPTSQGG QHRQEPASVP PSSHQEAPPL GAVASSVQLP
ESTAQLLQAR TQLLRQSGTT TTKKNEPAAP GKARPANSAL ERLASVTERS QQRLAAKTTE
EKKPAKKEAY RWTAKNQPEV AAEPIATPKA LRSALEHEKT PELSAKLAEE AIARDPWAAE
VNQLQLPKLV QQLALNAFKQ EIEPGNICLH LRSAQRHLNS ASAQKALSDA LSELHGNAVT
LSVIEDDNPA ERTPLEWRQA IYEEKLAQAR QSIIADNNIQ TLRRFFDAEL DEDSIRPI