Gene YpsIP31758_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3053 
SymbolhemH 
ID5386743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3438158 
End bp3439120 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID640866059 
Productferrochelatase 
Protein accessionYP_001402013 
Protein GI153950660 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAAA GCAAACCCGG CGTATTAATG GTTAATTTGG GGACACCAGA TGCTCCAACG 
TCGAAAGCTA TCAAGCGTTA TTTAGCTGAG TTTCTGAGTG ACCGCCGGGT AGTTGATACT
TCCCCATTGC TATGGTGGCC ATTGCTGCAT GGTGTTATTT TACCGCTTCG GTCACCACGT
GTAGCAAAAC TTTATCAATC CGTTTGGATG GAAGAGGGCT CTCCTTTATT GGTTTATAGC
CGCCGCCAGC AGAAAGCACT GGCAGCAAGA ATGCCTGATA TTCCCGTAGA GTTAGGCATG
AGCTATGGTT CACCAAATTT GCCAGAGGCT ATTGAAAAGT TATTAGCGCA GGGCGTCACC
AACCTGGTTA TATTACCGCT TTACCCGCAA TATTCCTGTT CAACCAGCGC CGCTGTCTGG
GATGCTGTTG CTCGGGTTCT GAAAGGTTAC CGCCGTTTAC CCTCAATTTC TTTTATTCGT
GATTATGCTG AGCATCCAGC GTATATTTCA GCATTAAAAC AGAGTGTTGA GCGCTCTTTC
GCGGAACATG GTCAGCCAGA CCGATTAGTC ATGTCTTTTC ATGGCATTCC TAAACGCTAT
GCGCAATTGG GTGATGATTA TCCTATCCGC TGTGAAGATA CCAGCCGGGC ACTGAGGGCT
GCATTACCTC TGCCTGCCGA GAAAATCATA ATGACTTATC AATCCCGCTT TGGCCGTGAA
CCCTGGTTGA CACCTTATAC CGATGAAACC CTAAAAAGTT TACCTTCTCA AGGCGTTAAG
CATATTCAGC TTATTTGCCC AGGTTTCTCT GCCGATTGTC TGGAAACTCT GGAAGAAATA
AAAGAGCAAA ATCGAGAGTT TTTCTTGCAT GCGGGCGGAG AGAAGTTTGA ATACATCCCA
GCATTGAATG ATGACGAGGG GCATATTGCC CTGTTAGAAC AGTTAATTCG ACATAATATA
TAA
 
Protein sequence
MMQSKPGVLM VNLGTPDAPT SKAIKRYLAE FLSDRRVVDT SPLLWWPLLH GVILPLRSPR 
VAKLYQSVWM EEGSPLLVYS RRQQKALAAR MPDIPVELGM SYGSPNLPEA IEKLLAQGVT
NLVILPLYPQ YSCSTSAAVW DAVARVLKGY RRLPSISFIR DYAEHPAYIS ALKQSVERSF
AEHGQPDRLV MSFHGIPKRY AQLGDDYPIR CEDTSRALRA ALPLPAEKII MTYQSRFGRE
PWLTPYTDET LKSLPSQGVK HIQLICPGFS ADCLETLEEI KEQNREFFLH AGGEKFEYIP
ALNDDEGHIA LLEQLIRHNI