| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3049 |
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| Symbol | ddhC |
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| ID | 5387564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3433351 |
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| End bp | 3434664 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640866055 |
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| Product | CDP-4-keto-6-deoxy-D-glucose-3-dehydrase |
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| Protein accession | YP_001402009 |
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| Protein GI | 153948881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG AAGAATTACG TCAACAGATT GCTGAGCTGG TTGCTCAGTA CGCTGAAACG
GCTATGGCCC CTAAGCCATT TGAAGCAGGT AAGAGTGTCG TTCCACCTTC AGGTAAAGTT
ATTGGTACCA AAGAACTCCA GTTAATGGTT GAAGCTTCTT TAGACGGTTG GCTAACAACG
GGCCGTTTTA ATGACGCTTT TGAGAAAAAA CTAGGCGAGT ATTTGGGCGT TCCTTATGTT
CTGACTACAA CTTCTGGCTC TTCAGCTAAC TTATTGGCTT TGACCGCGCT GACCTCACCT
AAATTAGGGG TACGGGCGTT GAAGCCAGGT GACGAAGTTA TTACTGTTGC CGCAGGTTTT
CCAACCACAG TAAACCCAAC TATTCAGAAT GGGTTAATTC CTGTCTTTGT TGATGTTGAT
ATTCCAACTT ACAATGTAAA TGCTAGCCTG ATTGAAGCGG CGGTTAGTGA TAAAACCAAA
GCTATTATGA TTGCCCATAC ATTAGGTAAT CTATTCGATC TAGCTGAAGT TCGCCGAGTA
GCTGATAAAT ATAACCTGTG GTTAATTGAA GACTGCTGCG ATGCGTTGGG TTCCACCTAC
GATGGAAAAA TGGCTGGTAC ATTTGGCGAT ATTGGTACCG TTAGCTTCTA TCCCGCTCAT
CATATCACCA TGGGTGAAGG TGGGGCGGTA TTTACCCAAT CGGCGGAACT GAAGAGTATC
ATCGAATCTT TCCGTGATTG GGGTCGTGAT TGTTATTGTG CTCCAGGCTG TGACAACACA
TGTAAAAAGC GTTTCGGCCA GCAACTTGGC TCTTTACCAT TCGGTTATGA TCATAAATAT
ACTTATTCCC ATTTAGGCTA TAACCTAAAA ATCACAGATA TGCAGGCTGC CTGTGGTTTG
GCGCAACTAG AGCGCATAGA AGAGTTTGTT GAAAAACGTA AAGCTAACTT TAAATACCTT
AAAGACGCAC TCCAATCTTG CGCTGACTTT CTTGAGTTAC CAGAAGCGAC TGAAAATTCA
GATCCATCAT GGTTTGGTTT CCCTATCACT CTGAAAGAAG ATAGCGGAGT TAGCCGCATT
GATCTGGTTA AATTCCTTGA TGAAGCTAAA GTGGGAACTC GCCTACTATT TGCCGGTAAT
TTAACTCGCC AGCCGTATTT CCATGATGTG AAATACCGTG TTGTTGGTGA ATTGACAAAC
ACCGATAGAA TTATGAATCA AACTTTCTGG ATTGGTATTT ACCCAGGCCT GACACATGAT
CATTTGGATT ATGTCGTGAG TAAGTTTGAA GAGTTCTTTG GTTTGAATTT TTAA
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| Protein sequence | MSQEELRQQI AELVAQYAET AMAPKPFEAG KSVVPPSGKV IGTKELQLMV EASLDGWLTT
GRFNDAFEKK LGEYLGVPYV LTTTSGSSAN LLALTALTSP KLGVRALKPG DEVITVAAGF
PTTVNPTIQN GLIPVFVDVD IPTYNVNASL IEAAVSDKTK AIMIAHTLGN LFDLAEVRRV
ADKYNLWLIE DCCDALGSTY DGKMAGTFGD IGTVSFYPAH HITMGEGGAV FTQSAELKSI
IESFRDWGRD CYCAPGCDNT CKKRFGQQLG SLPFGYDHKY TYSHLGYNLK ITDMQAACGL
AQLERIEEFV EKRKANFKYL KDALQSCADF LELPEATENS DPSWFGFPIT LKEDSGVSRI
DLVKFLDEAK VGTRLLFAGN LTRQPYFHDV KYRVVGELTN TDRIMNQTFW IGIYPGLTHD
HLDYVVSKFE EFFGLNF
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