Gene YpsIP31758_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3038 
Symbol 
ID5385167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3420411 
End bp3421154 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content32% 
IMG OID640866044 
Productglycosyl transferase, group 2 family protein 
Protein accessionYP_001401998 
Protein GI153949638 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.654585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA GTATTATTAC TGCTACATAT AATAGTGAGA GAACAATTTC GGATACCCTA 
TCTTCTTTGG AGAAACAAAC CTATCTGGAT GTTGAGTATA TTATTGTTGA TGGTGCATCA
AAGGATAATA CATTAACTGT TATTAGTCAG AATTCTACGC GAGTCACTAA GATTATTAGT
GAGTCTGATC AAGGTATTTA TGATGCTTTG AATAAAGGGA TAGATTTGGC AACAGGTGAC
ATTATTGGTT TTTTACATTC TGATGATTTA CTTGCCTATC CAGGGGCCCT ATCTGATATT
GTAGAAACCT TTGAAAAACA GCAATGTGAT GCTGTATATG GTGACTTACA GTATGTCGCA
AAAAATGATT TAAATAAGGT AATCAGATGT TGGAAAAGTG GTTTTTTTAA CCATGAAAAA
ATGAAGTATG GTTGGATGCC TCCCCATCCT ACTTTTTATA TGAAACGAGA TCTTTATATA
AGGTTTGGAG GTTTTGACTT AAGTTATAAA ATATCAGCCG ACTATGATTC TCTTACGCGT
TATATAATCA ATTATAAAAT TAAAATTGCT TATTTACCTA AGGTAATTAT TAAAATGAGA
GTTGGGGGGG TAAGTAATCG GTCATTGGGA AGTATGTTGT TAAAATCTAA AGAAGATATA
CAAATAATGA AACTCCGTGG GCTATTCTGG CCTATGTCGT TTTTATGCAA AAACTTATCT
AAACTTCCTC AGTTTTTAAA GTGA
 
Protein sequence
MKISIITATY NSERTISDTL SSLEKQTYLD VEYIIVDGAS KDNTLTVISQ NSTRVTKIIS 
ESDQGIYDAL NKGIDLATGD IIGFLHSDDL LAYPGALSDI VETFEKQQCD AVYGDLQYVA
KNDLNKVIRC WKSGFFNHEK MKYGWMPPHP TFYMKRDLYI RFGGFDLSYK ISADYDSLTR
YIINYKIKIA YLPKVIIKMR VGGVSNRSLG SMLLKSKEDI QIMKLRGLFW PMSFLCKNLS
KLPQFLK