Gene YpsIP31758_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3021 
Symbol 
ID5386772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3400689 
End bp3401324 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID640866026 
Productmultifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 
Protein accessionYP_001401981 
Protein GI153949498 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.116917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCA AGAACGTTTT CCGCTGGCAT CTTCCCTTCC TTTTACTGTT GGGATTATTC 
AGTTTGCGTG CCGCCGCAAC CGATACACTA TTGATTCTCG GCGACAGTTT AAGCGCCGGT
TACCGCCTGC CTATTGCACA GGCATGGCCT TCGCTATTGG ATAAAAAATG GCAAGCCACG
CCTTCGTTAC CGAAGGTGGT CAATGCCAGT ATCAGTGGAG ATACCGCCGC GCAAGGGCTA
GCGCGCTTAC CCGCCCTACT CAAGCAACAT CAGCCACGCT GGGTGCTGAT TGAACTGGGT
GCCAATGACG CGCTGCGCGG GTTTCCGACG CAGGACATTC AACGGGATCT GAGCGAAATT
ATCAATCAGA TAACCGCAGC GAAAGCCCAG CCATTATTGA TGCAAATCCG TATTCCCCCC
AACTATGGCC GCCGTTATAC TGATGCTTTC ACCGCTATCT ATCCACAACT GGCGCAACAG
TTCGACATCC CCCTACTCCC TTTTTTTATG GAACAGGTTG CCGTTAAGCC AGAGTGGATG
CAGGATGATG GTTTACACCC TAACGGCGAT GCCCAACCGT TTATCGCGGA TTGGATGGCG
CAACAACTCA AGCCGTTAGT TGTTGATCCG AAATAA
 
Protein sequence
MNFKNVFRWH LPFLLLLGLF SLRAAATDTL LILGDSLSAG YRLPIAQAWP SLLDKKWQAT 
PSLPKVVNAS ISGDTAAQGL ARLPALLKQH QPRWVLIELG ANDALRGFPT QDIQRDLSEI
INQITAAKAQ PLLMQIRIPP NYGRRYTDAF TAIYPQLAQQ FDIPLLPFFM EQVAVKPEWM
QDDGLHPNGD AQPFIADWMA QQLKPLVVDP K