| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2978 |
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| Symbol | |
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| ID | 5384778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3350778 |
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| End bp | 3351632 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640865984 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001401940 |
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| Protein GI | 153950415 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAG CAAGCAATCT GAGTGAACTA CAGCAGCAGA TCCGTGATCG TTACGACAAC
CTGAGTAAGC GGCTCCAGCA GGTTTCCCGC TATGTGTTGG ACAATACCAA CAGCGTGGCG
TTTGACACCG TCGCCGTCAT TGCCGAACGC GCAGACGTGC CTCCGTCAAC CTTAATCCGT
TTTGCTAACG CCTTTGATTT CAGCGGCTTC AACGAGATGA AACAACTGTT TCGTATGAAT
CTGGTGGAAG AGACCGCGAG TTATACCGAT CGTGCACGGC TGTTTCGCGC AATGGAAAGC
GAAGCCGTGC CGGAAACGCC ACTCGGTATC CTGCAAGAGT TTGCCCGATC CAATGCTCAG
GCACTACAGC AGTTGGCGGC ACGTACTGAA CCAGAGATGC TGCAACGCGC GGTGAAACTG
CTTGCTCAGG CCGATACTAT TTATGTGGTG GGCCTGCGCC GCTCGTTCAG CGTGGCCGCC
TATCTGACCT ACGCACTCAG CCATTTGGAA TGTCGCCCAG TACAACTTCA TGGCCTCGGG
GGGATGTTGC GCGAGCAGGT GAACAGCATT AAAGCACGCG ATATCGTGGT TTCTATCAGT
TTCTCTCCTT ACGCCGAAGA GACCGTGATG GTCAGCGAAA TAGCCGCTAG CACGGGTGCC
CGGCAGATTG TCATTACCGA CAGCCAGATA AGCCCGCTCG CCACGTTCAG CGATCTCTGT
TTTGTGGTGA AAGAGGCTCA GGTAGATGCC TTCCGATCTC AATCAGCCAC GCTCTGTCTA
GTGCAGTCGC TGGTCGTGGC GTTGGCCTAC CAGCAGGAGG ATCAGGCTGG GGCCGCGCTG
GTGCACAGAC AGTGA
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| Protein sequence | MTTASNLSEL QQQIRDRYDN LSKRLQQVSR YVLDNTNSVA FDTVAVIAER ADVPPSTLIR
FANAFDFSGF NEMKQLFRMN LVEETASYTD RARLFRAMES EAVPETPLGI LQEFARSNAQ
ALQQLAARTE PEMLQRAVKL LAQADTIYVV GLRRSFSVAA YLTYALSHLE CRPVQLHGLG
GMLREQVNSI KARDIVVSIS FSPYAEETVM VSEIAASTGA RQIVITDSQI SPLATFSDLC
FVVKEAQVDA FRSQSATLCL VQSLVVALAY QQEDQAGAAL VHRQ
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