Gene YpsIP31758_2976 details

Gene Information

• Locus tag: YpsIP31758_2976
• ID: 5386210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3346965
• End bp: 3348911
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640865982
• Product: thiamine pyrophosphate-dependent enzyme
• Protein accession: YP_001401938
• Protein GI: 153949603
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3962] Acetolactate synthase

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCG TAAACATGGC GATGAAAACA GTACGGATGA CCATGGCACA GGCGCTGGTC 
AGGTTTCTTA ATCAGCAATA TGTGGCCATT GATGGTCAGG AGGTCGCATT TGTCCACGGC 
GTGATGACGA TTTTCGGGCA CGGCAATGTA CTCGGTATCG GCCAGGCTCT GGAAGAAAAT 
CCGGGCCATT TACAGGTGCA TCAGGGCTGT AACGAGCAGG GCATGGCGCA TATGGCGATT 
GGTTTTGCGA AACAGTATCG CCGTCAGCGT ATCTATGCCG TCAGTTCGTC TATCGGGCCG 
GGAGCCGCCA ATATGGTCAC CGCAGCGGCC ACCGCCACGG CAAACCGCAT TCCGCTGCTG 
CTATTGCCGG GGGATATCTA CGCCAGCCGT CAGCCTGACC CGGTGTTACA GCAGATCGAG 
CAATATCACG ACCTTAGTAT TAGCACTAAC GATTGCTTCC GCCCGGTATC ACGTTACTGG 
GATCGCATTA ATCGCCCTGA GCAATTGATG AGCGCCATGC TGAGTGCTAT GCGAGTACTG 
ACTGACCCGG CGGATACCGG TGCGGTGACC CTTTGTCTGC CTCAGGATGT GCAGGGCGAA 
GCGTGGGATT ACCCGGCGAG CTTCTTTGAG CGCCGGGTGC ATCGTATCGA GCGCCGTCCA 
CCGGATGCGC GCAGGCTTTC TGATGCGCTC AGCCTGATCG CCCGTAAACG GCGTCCGCTG 
GTGGTGTGTG GCGGCGGCGT GCGCTATTCG GGGGCGCATG AGGCGTTTCG TGCATTTGTG 
GAAAACGCTC AATTACCCTT TACTGAAACC CAAGCGGGCA AAGGGGCGCT GCCAAGTGAT 
CATCCCCTCA ACTTGGGGGG AATTGGTGTC ACTGGCGGGT TGGCAGCTAA CCGGTTAGCT 
CCACAGGCTG ATCTGGTGAT CGGCATTGGT ACCCGGCTCA CCGATTTCAC TACGGGTTCC 
AAAGCACTAT TTTCTCACCC GGAGGTGGCG TTTTTGCTGC TTAACGTGGC GGAATTCGAT 
GCACTTAAAC TGGATGCCAC GGCCCTGATT GCCGATGCGC GGGTGGGGCT TGAGGCATTA 
ACCGAAGGGC TGGCAGGTTA TCGCACTGCT TGGCAGGGCG ATATCATTGA GGCCAAAGCA 
GCGTGGTGCG ACGAATGTCA ACGGCTTTGG TCACGCACCT GGCGGCCTGA TGAGGTGCCA 
GAGGTGGCCG GTCATCTTGA TGATTCGCTA CAAGAATACG CCGAGGTGCT CAATACCACA 
CTGACCCAGA CTCGGGTACT TGGGCTTATC AACCAGCATA TTGAAGACGA TGCCATTGTC 
GTGGGGGCGG CGGGGTCGCT GCCGGGGGAT TTACAGCGTC TATGGCAGGT AAAAACGGCA 
GACACCTATC ATCTTGAATA CGGTTATTCA TGCATGGGCT ATGAAATCGC TGCCGCCATC 
GGGGCGAAAA TTGCGATGCC ACATCAACCG GTGTACGCCA TGGTGGGTGA TGGCTCCTAT 
ATGATGCTGC ATTCCGAGCT GCACACGGCG GTACAGGAGG GGCTAAAAAT TACCGTCCTA 
CTGTTTGATA ACGCCGGATT CGGCTGTATC AACAACCTGC AAATGGGCCA CGGGATGGGC 
AGTTTTTGTA CCGAGAGCCG CCACCGTAAC CACGAGTCGG GGCAACTCAA TGGCCCATTG 
ATTCGCGTTG ATTTCGCCCA AAACGCCGAA AGTTATGGCT GCCGCGCCTG GCGGGTGCAC 
GATGAACCAA GCCTGCTAGC GGCATTGGCA GCATCCCGCG ATCATCCGGG GCCGGTGCTA 
CTGGATATTA AAGTCTTGCC GAAAAGCATG ACGCACGATT ATGCGTCTTG GTGGCGTACT 
GGCGATGCGC AAATCGCCCG TTCACCCGCG GTACAGCAGG CTGCAGAGCG AACCCAGATG 
AAGGTAAAAC GTGCCCGTCA GTACTAA 

 

Protein sequence

MSTVNMAMKT VRMTMAQALV RFLNQQYVAI DGQEVAFVHG VMTIFGHGNV LGIGQALEEN 
PGHLQVHQGC NEQGMAHMAI GFAKQYRRQR IYAVSSSIGP GAANMVTAAA TATANRIPLL 
LLPGDIYASR QPDPVLQQIE QYHDLSISTN DCFRPVSRYW DRINRPEQLM SAMLSAMRVL 
TDPADTGAVT LCLPQDVQGE AWDYPASFFE RRVHRIERRP PDARRLSDAL SLIARKRRPL 
VVCGGGVRYS GAHEAFRAFV ENAQLPFTET QAGKGALPSD HPLNLGGIGV TGGLAANRLA 
PQADLVIGIG TRLTDFTTGS KALFSHPEVA FLLLNVAEFD ALKLDATALI ADARVGLEAL 
TEGLAGYRTA WQGDIIEAKA AWCDECQRLW SRTWRPDEVP EVAGHLDDSL QEYAEVLNTT 
LTQTRVLGLI NQHIEDDAIV VGAAGSLPGD LQRLWQVKTA DTYHLEYGYS CMGYEIAAAI 
GAKIAMPHQP VYAMVGDGSY MMLHSELHTA VQEGLKITVL LFDNAGFGCI NNLQMGHGMG 
SFCTESRHRN HESGQLNGPL IRVDFAQNAE SYGCRAWRVH DEPSLLAALA ASRDHPGPVL 
LDIKVLPKSM THDYASWWRT GDAQIARSPA VQQAAERTQM KVKRARQY