Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2958 |
Symbol | cspE |
ID | 5384546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3330068 |
End bp | 3330277 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640865964 |
Product | cold shock protein CspE |
Protein accession | YP_001401920 |
Protein GI | 153947984 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0282333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAGA TTAAAGGTAG CGTTAAGTGG TTCAATGAAT CCAAAGGTTT CGGCTTCATT ACCCCAGAAG ATGGTAGCAA GGACGTTTTT GTTCATTTTT CTGCCATCGC TAGCAATGGT TTCAAAACGC TTGCTGAAGG CCAGCGTGTA GAATTTGAAA TCACGAACGG TGCCAAAGGG CCATCTGCTG CTAATGTTAT CGCTATCTAA
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Protein sequence | MSKIKGSVKW FNESKGFGFI TPEDGSKDVF VHFSAIASNG FKTLAEGQRV EFEITNGAKG PSAANVIAI
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