| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2930 |
|---|
| Symbol | |
|---|
| ID | 5386123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3304940 |
|---|
| End bp | 3306721 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640865936 |
|---|
| Product | Ig-like domain-containing protein |
|---|
| Protein accession | YP_001401892 |
|---|
| Protein GI | 153946983 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAACA GATTTTTTAA AGTGCCGTTC GCGTCAAACG GTGACACGCA AACAATTCAA
GACGAAACAG ATAACGAGGG GTTTGTTAGT TTTAATGAGG GCTGGGGCGG GGACTACGAG
CGTGACTTGA GGACAGACAC CCGAGCCAAG CCGGTTGGCC GCAAAGAAAT GAATTACGTA
TTAAATGCGA TAACACGAAA TATTCGGCAG TATCAAACTA CGGGTTTTCC TGAATTTATT
ACAGCAGCAG ATAATAACGG GGCGGCGTTC GCGTACGATA CCGGCGTTGT TGTCATGCAC
AACAATGCTC TCTATTTGTC ACTTGTTTCA AATAATACCA GCGTCCCCGG CACTGATGAA
AGCACATGGC AGGTGTATAT TCAGCGCGAA TCAACAGAAG GAGAAACCCT CGCGGGGGTG
AGTGCGATTA GTGCGATCAC GCCGCGACGA TTAAAATTAA AAACGGATAT CATTGAAAAT
AGTATTACTG ATATTAGCAG TTCATTAAGC CGCGTCGGTA ATCTGCAAGT TGCACAAGTC
TATTTAGAGT CGTCGGGGGT TGTCACTTTA ACTGTTCCGA CTGACTGTGT GCAAATATTG
CTCATTGGTC GCTACGTTAC TGACGGCGTA GAAAGCCGGG ATCGCTGGGA TAGTACTATC
TATGCGAATG GAGAGCTTGT TGATACGACG TCATTCTACG GGTTTGTGAC TGGCGGCAGT
GGCCACGGAC ACCACCGGCG GGAATTTCTA CCTTTTAGTA AATTAATTGA TATGCAAGTA
CTGGCAGGAG ACCCAATTAA TTTTCAATAC ACAAGCAATC GCAACAGTAA TACAACATTC
ACAGTTTTCT ACATTCAGGG CGTGAGTACT GAAGAGCCTG ATCAGCCATC AACTATCATC
ATTTCGCCGC TTAACAGCGT AATCAATGCA GGGACTAGCC AGCAACTGAT CGCGATGGTC
CTGCCATCAA GTGCCGCAGC TGAATACCCT GTCACGTGGC AAGTATCCGA CCCGGCGCTG
GGAACTATTG ACAGCAACGG CAGGTATTCC GCAAATGTTG GCGCTAGCGG CACACAAAGC
GTTATAGCTA GCGTTTCCAC GGGACTGGCG TCCACAGCGA TAATAACGCA ACACATTTTT
CTGGCCGGAA TTGAAATTGG TGATGCTCCT GCAGACTTAG TTGCCGGGAA TACTTACACC
GTACCTGTTA CGTATACACC GTCAAATTAC ACCGAGGCGA TACTCACATC ATCATCAGAC
TCAACGAGTG CGACATTATC AGCCCTCGGA ACGCTATCAA TCAGTAACGC AGGCTCGACA
ACGTTATCGT TGGCTGGCGC AAATTCTGGT ATCACAAAGT CAATAACGAT TGTTGCTGTA
GATAAAGAAA CGCCGGATGT GTTTCTTAAA ATTGAAAATA ACTTATCTGA TGTGTCGAGC
ATATCCGAGG CCCGAGAAAA TCTTGAACTG GGCGAGCTGG CAACCAAGGA TTCGCTAACC
GCCGGCGATG TAGGAGCTGT TCATATTGCT GATGTAGCGA TAGTTGCAGA GTTGGATTTA
AACAGCATGA CGGGGCCGGG GGAGTACTTT CAAAACATAT CGAGCAACGC CCTACTGAGT
TTAAATTATC CGATCAACGT TGCAGGGGCG TTAAAGGTTT ACAGGACAGG TGTTGATGAA
GTCGGATGCA GACAAGTGTA CATGCCCTAT AACTCAACAT CAGAGTATCG ACGCTACGCG
TACGGGGATC CGCTAGTGTT CTCTGCATGG ATTGAGAAAT AA
|
|---|
| Protein sequence | MDNRFFKVPF ASNGDTQTIQ DETDNEGFVS FNEGWGGDYE RDLRTDTRAK PVGRKEMNYV
LNAITRNIRQ YQTTGFPEFI TAADNNGAAF AYDTGVVVMH NNALYLSLVS NNTSVPGTDE
STWQVYIQRE STEGETLAGV SAISAITPRR LKLKTDIIEN SITDISSSLS RVGNLQVAQV
YLESSGVVTL TVPTDCVQIL LIGRYVTDGV ESRDRWDSTI YANGELVDTT SFYGFVTGGS
GHGHHRREFL PFSKLIDMQV LAGDPINFQY TSNRNSNTTF TVFYIQGVST EEPDQPSTII
ISPLNSVINA GTSQQLIAMV LPSSAAAEYP VTWQVSDPAL GTIDSNGRYS ANVGASGTQS
VIASVSTGLA STAIITQHIF LAGIEIGDAP ADLVAGNTYT VPVTYTPSNY TEAILTSSSD
STSATLSALG TLSISNAGST TLSLAGANSG ITKSITIVAV DKETPDVFLK IENNLSDVSS
ISEARENLEL GELATKDSLT AGDVGAVHIA DVAIVAELDL NSMTGPGEYF QNISSNALLS
LNYPINVAGA LKVYRTGVDE VGCRQVYMPY NSTSEYRRYA YGDPLVFSAW IEK
|
|---|
| |