| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2921 |
|---|
| Symbol | gltJ |
|---|
| ID | 5386879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3296554 |
|---|
| End bp | 3297294 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640865927 |
|---|
| Product | glutamate/aspartate ABC transporter, permease protein GltJ |
|---|
| Protein accession | YP_001401883 |
|---|
| Protein GI | 153948463 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.876991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAG ACTGGAACTG GGGCATTTTT TTACAGCCAG CCCCTTTCGG CAATACCACC
TATCTCGGTT GGATTTGGTC CGGCTTTCAG GTCACGGTCG CATTATCATT ATGTGCTTGG
GTGATCGCCT TCTTCGTCGG TTCACTGTTT GGTATTTTAA GAACGGTACC CAACCGAATC
CTTTCAGGAA TAGGGGCTTG TTACGTTGAA TTGTTTCGTA ACGTACCACT GATCGTGCAA
TTTTTTACCT GGTATCTGGT GGTTCCCGAA CTGTTGCCAG TGAACCTTGG CACATGGTTT
AAAAGTGAAC TGGCACCCAA TATACAGTTC TTCCTCTCAT CTATGATTTG CCTTGGATTA
TTCACTGCGG CGCGGGTTTG TGAACAGGTT CGCGCAGGAA TTCAATCACT GCCTCGTGGT
CAAAAAGCAG CGGGCCTGGC AATGGGGCTC ACCCTCACAC AGACTTACCG CTATGTTTTA
CTGCCCAATG CATATCGGGT GATTATTCCC CCGATGACCT CAGAAATGCT CAATCTGGTA
AAAAACTCCG CAATTGCCTC AACCATCGGG CTAGTCGAAA TGGCGGCACA AGCGGGTAAA
TTGCTGGATT ATTCAGCGCA TGCCTATGAA TCCTTCACCG CCATCACCCT AGGTTATGTG
CTGATCAATG CCGTGATCAT GCTGTTAATG CGCTTAGTTG AAAAGAAAGT GCAATTACCC
GGCAATCTGG GGAGTAAATA A
|
|---|
| Protein sequence | MAIDWNWGIF LQPAPFGNTT YLGWIWSGFQ VTVALSLCAW VIAFFVGSLF GILRTVPNRI
LSGIGACYVE LFRNVPLIVQ FFTWYLVVPE LLPVNLGTWF KSELAPNIQF FLSSMICLGL
FTAARVCEQV RAGIQSLPRG QKAAGLAMGL TLTQTYRYVL LPNAYRVIIP PMTSEMLNLV
KNSAIASTIG LVEMAAQAGK LLDYSAHAYE SFTAITLGYV LINAVIMLLM RLVEKKVQLP
GNLGSK
|
|---|
| |