Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2915 |
Symbol | miaB |
ID | 5385014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3288821 |
End bp | 3290245 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640865921 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001401877 |
Protein GI | 153950190 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000321738 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA AACTGCATAT CAAAACCTGG GGTTGCCAGA TGAATGAATA CGATTCATCT AAAATGGCAG ATCTCTTGGC CAGTACCCAT GGCTACCAGT TAACCACCAT CCCGGAAGAA GCGGATTTAC TGCTGCTAAA TACCTGTTCT ATCCGGGAAA AAGCACAGGA AAAAGTATTC AGCCTGCTAG GGCAATGGAA ATTATTGAAA GAGAAAAACC CGCAGTTGAT TATTGGGGTC GGTGGTTGCG TGGCGTCACA GGAAGGTGAA CAATTGCGCC AGCGCGCCCC CTGTGTCGAT GTCATCTTCG GGCCACAAAC GCTGCATCGT TTACCGGAAA TGATTAACCA CGTGCAAGGA ACGAATAGCC CTGTCGTGGA TATCAGTTTT CCCGAAATTG AAAAATTTGA CCGTTTGCCA GAACCACGGG CTGAAGGCCC AACTGCGTTT GTTTCGATCA TGGAAGGCTG CAATAAATAT TGTACATTCT GTGTCGTACC CTACACCCGA GGCGAGGAAG TCAGCCGTCC AAGCGATGAC ATTCTTTTTG AAATCGCCCA GTTAGCCGCT CAAGGCGTAC GTGAAGTCAA CTTACTCGGC CAGAATGTTA ACGCCTACCG CGGGGCAACC TACGATGGCG ATATCTGTAG TTTTGCCGAG CTGTTGCGTT TGGTTGCGGC CATTGATGGT ATCGATAGGA TACGATTTAC CACCAGCCAC CCCATTGAGT TTACTGACGA TATCATTGAT GTTTATCGCG ATACGCCTGA ATTGGTGAGC TTCCTGCATT TGCCGGTACA AAGCGGTTCT GACCGTATTT TGACCATGAT GAAGCGTGCC CATACCGCCC TGGAATACAA AGCCATCATC CGCAAACTGC GTCAGGCGCG CCCTGATATC CAGATAAGTT CTGATTTTAT TGTCGGCTTC CCTGGTGAAA CCCAGCAGGA TTTTGAACAG ACCATGAAAC TGGTCGCAGA TATTCATTTT GATACCAGCT ACAGCTTTAT TTACTCCCCG CGTCCCGGCA CACCAGCGGC TGATTTACCC GACAATGTGT CCGAAGAGGA GAAAAAACAG CGGCTACATA TCCTGCAACA ACGCATTAGC CAACAGGCGA TGGAAATTAG CCGTAAGATG GTAGGGACAG TACAGCGTGT TTTGGTGGAG GGGACCTCTC GCAAAAATGT CATGGAACTG GCCGGGCGTA CGGAAAACAA CCGCGTCGTG AACTTTGAGG GTTCACCCGA CATGATTGGT AAATTCGTTG ATGTCGAAAT TGTTAACGTT TATGCCAGTT CACTGCGCGG CATTTTACTG CGTACAGAAG ATCAGATGGA CCTGCGAACC CACGAGTCAC CGCAATCGGT GATTGCTCGC ACCCGTAAAG AAAATGAAAT TGGTGTAGGT ATTTATCAGC CTTAA
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Protein sequence | MTKKLHIKTW GCQMNEYDSS KMADLLASTH GYQLTTIPEE ADLLLLNTCS IREKAQEKVF SLLGQWKLLK EKNPQLIIGV GGCVASQEGE QLRQRAPCVD VIFGPQTLHR LPEMINHVQG TNSPVVDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CTFCVVPYTR GEEVSRPSDD ILFEIAQLAA QGVREVNLLG QNVNAYRGAT YDGDICSFAE LLRLVAAIDG IDRIRFTTSH PIEFTDDIID VYRDTPELVS FLHLPVQSGS DRILTMMKRA HTALEYKAII RKLRQARPDI QISSDFIVGF PGETQQDFEQ TMKLVADIHF DTSYSFIYSP RPGTPAADLP DNVSEEEKKQ RLHILQQRIS QQAMEISRKM VGTVQRVLVE GTSRKNVMEL AGRTENNRVV NFEGSPDMIG KFVDVEIVNV YASSLRGILL RTEDQMDLRT HESPQSVIAR TRKENEIGVG IYQP
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