Gene YpsIP31758_2893 details

Gene Information

• Locus tag: YpsIP31758_2893
• Symbol: smpB
• ID: 5384292
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3263452
• End bp: 3263934
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640865893
• Product: SsrA-binding protein
• Protein accession: YP_001401856
• Protein GI: 153948403
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000000000202401
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAGA AAAAAGCATA CAAACCCGGT TCCGCAACCA TTGCGCAAAA TAAACGAGCC 
CGTCACGAAT ACTTCATTGA AGAAGAGTTC GAAGCTGGGC TTGCACTGCA AGGTTGGGAA 
GTAAAATCAC TGCGTGCAGG CAAAGCAAAT ATCAGTGACA GCTACGTAAT GTTTAAAAAC 
GGTGAGGCAT TCCTGTTTGG GGCCACAATT ACGCCGTTGA ACGTTGCGTC GACTCATGTT 
GTTTGCGAGC CTATGCGTAC CCGTAAACTG CTGTTGAATA AACGCGAACT GGATTCCTTG 
TTTGGCCGAG TGAACCGAGA AGGCTACACG GTTGTCGCTC TCTCCATGTA TTGGAAAAAT 
GCCTGGGTGA AAGTTAAAAT CGGCGTAGCA AAAGGTAAAA AAGATAACGA CAAGCGCGAT 
GATATTAGAG ATCGTGAGTG GAAGTTAGAC AAAGCGCGCA TCATGAAGCA CGCAAATCGT 
TAA 

 

Protein sequence

MTKKKAYKPG SATIAQNKRA RHEYFIEEEF EAGLALQGWE VKSLRAGKAN ISDSYVMFKN 
GEAFLFGATI TPLNVASTHV VCEPMRTRKL LLNKRELDSL FGRVNREGYT VVALSMYWKN 
AWVKVKIGVA KGKKDNDKRD DIRDREWKLD KARIMKHANR