| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2875 |
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| Symbol | cydB |
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| ID | 5384541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3242507 |
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| End bp | 3243646 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640865875 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001401838 |
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| Protein GI | 153949949 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.00503727 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATT ATGAAGTATT ACGATTTATC TGGTGGCTGC TGATCGGTGT GCTGCTGATT
GGTTTCGCAG TCACCGATGG TTTCGATATG GGTGTGGGTA TCCTGCTACG TATCATCGGT
AAAAATGATA CAGAGCGCCG TATCATGATT AACTCGATTG CTCCTCACTG GGATGGTAAT
CAGGTTTGGT TAATCACGGC AGGTGGGGCA CTGTTTGCGG CCTGGCCAAT GGTCTATGCC
GCTGCATTTT CCGGCTTCTA TATCGCGATG ATTCTGGTGC TGGCAGCCTT GTTCTTCCGC
CCGGTCGGTT TTGACTACCG TTCTAAGCTG GAGAATAGCC GCTGGCGTAA CATGTGGGAC
TGGGGCATCT TTATCGGTAG CTTTGTGCCG GCAGTCGTCT TTGGTGTGGC TTTTGGTAAC
TTGCTGCAAG GCGTACCTTT CCACATGAAT GAGTATATGC GCCTGTTCTA CACCGGTAAC
TTCTTCCAGC TACTGAACCC GTTTGGTTTG TTGGCCGGTA TTGTCAGCTT GACCATGTTG
GTGACGCAAG GCGCGACTTA CCTGCAAATG CGTACGCGTG GTGAACTGCA CCTTCGTTCC
CGTAAGGCCG CTCAGATCTC GGCTCTGGTA ATGAGTGTTG CCTTCTTGCT CGCGGGTATC
TGGTTAGTTA AAGGTATTGA CGGCTTTGTT ATCACTTCAG TATTGGATAC AGCAGCTGAA
TCTAACCCAA TGCGCAAAGA AGTGGCTCAT CAGGCCGGTG CATGGTTGAT TAACTTCAAC
AAGTATCCAA TCCTGTGGGC TTTACCTGCA CTTGGCGTGA TTTTGCCACT GTTCACCATT
TTGTTGTCAC GCTTTGAAAA AGGGGCATGG GCCTTCTTGT TCTCATCACT GACGATTGCT
TGTGTGATCT TGACTGCTGG CGTAACCATG TTCCCGTTCG TTATGCCATC AAGCACGATG
CCAAATGTCA GTCTGACCAT GTGGGATGCG ACATCTAGCC TGTTAACGCT GAAAGTGATG
ACGATTGTTG CGATAATCTT TGTGCCTATC ATCCTGCTTT ACACCAGTTG GTGTTACTAC
AAGATGTTCG GGCGCATTGA TAAAGAATTT ATCGAAAACA ACAAGCATTC ACTGTACTAA
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| Protein sequence | MFDYEVLRFI WWLLIGVLLI GFAVTDGFDM GVGILLRIIG KNDTERRIMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYA AAFSGFYIAM ILVLAALFFR PVGFDYRSKL ENSRWRNMWD
WGIFIGSFVP AVVFGVAFGN LLQGVPFHMN EYMRLFYTGN FFQLLNPFGL LAGIVSLTML
VTQGATYLQM RTRGELHLRS RKAAQISALV MSVAFLLAGI WLVKGIDGFV ITSVLDTAAE
SNPMRKEVAH QAGAWLINFN KYPILWALPA LGVILPLFTI LLSRFEKGAW AFLFSSLTIA
CVILTAGVTM FPFVMPSSTM PNVSLTMWDA TSSLLTLKVM TIVAIIFVPI ILLYTSWCYY
KMFGRIDKEF IENNKHSLY
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