| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2871 |
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| Symbol | tolQ |
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| ID | 5387504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3240864 |
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| End bp | 3241550 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640865871 |
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| Product | colicin uptake protein TolQ |
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| Protein accession | YP_001401834 |
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| Protein GI | 153950907 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000000018196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGACA TGAACATTCT GGATTTATTC CTGCAGGCAA GCCTATTCGT TAAGCTTATC
ATGCTGGTTC TGATGGGCTT TTCTATTGCG TCATGGGCTA TCATCATTCA ACGAACGCGA
ATTCTGAATG CGGCTACCCG CGATGCTGAA GCCTTCGAAG ATAAGTTTTG GTCCGGCATT
GAGCTTTCTC GCTTGTATCA GGAAAGTCAG GCTCGTCGCG ATACACTTAG CGGCTCAGAG
CAGATCTTCC ATTCTGGTTT CAAAGAGTTT GCCCGTCTAC ATCGTGCAAA CAGCCATGCA
CCAGAAGCGG TGATTGACGG TGCTTCCCGT GCGATGCGCA TTTCAATGAA CCGCGAGTTA
GAAGCGTTGG AAACTCATAT TCCGTTCCTC GGTACTGTCG GTTCAATCAG CCCGTATATC
GGTCTGTTTG GTACCGTATG GGGGATTATG CATGCCTTTA TTTCTCTGGG CGCCGTCAAA
CAGGCGACAT TACAGATGGT AGCACCGGGT ATTGCAGAAG CCCTGATTGC GACAGCGATC
GGCCTGTTTG CTGCTATTCC TGCTGTTATG GCCTATAACC GTCTGAATCA GCATGTGAAT
AAGCTTGAAC AAAACTATGA CAACTTCATG GAAGAGTTCA TTGCTATTCT GCATCGCCAG
GCTTTCGCCA GCACCGAAAG CAAATAA
|
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| Protein sequence | MADMNILDLF LQASLFVKLI MLVLMGFSIA SWAIIIQRTR ILNAATRDAE AFEDKFWSGI
ELSRLYQESQ ARRDTLSGSE QIFHSGFKEF ARLHRANSHA PEAVIDGASR AMRISMNREL
EALETHIPFL GTVGSISPYI GLFGTVWGIM HAFISLGAVK QATLQMVAPG IAEALIATAI
GLFAAIPAVM AYNRLNQHVN KLEQNYDNFM EEFIAILHRQ AFASTESK
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