Gene YpsIP31758_2870 details

Gene Information

• Locus tag: YpsIP31758_2870
• Symbol: tolR
• ID: 5387011
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3240423
• End bp: 3240851
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640865870
• Product: colicin uptake protein TolR
• Protein accession: YP_001401833
• Protein GI: 153948465
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000000000760123
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGAG TACGTGGTCG TAAGCGTCGC GAGCTTAAGT CTGAAATTAA TATTGTTCCC 
TTACTCGACG TTTTGCTGGT GCTGTTGTTG ATATTCATGG CAACCGCACC CATTATCACG 
CAAAGTGTCG AGGTAAACTT GCCAGATGCG ACGGATTCAA AAACGGTATC CAGTGATGAT 
AATCCGCCTG TAATTGTTGA GGTTTCCGGT GTTGGGCAAT ATACAGTAGT CGTTGATCAC 
CAACGGATGG AGCTGTTGCC TTCAGAGCAA GTGGTGGCAG AAGCTCAAGC ACGATTAAAA 
ACGAATCCGA AAACCGTGTT CCTGATCGGT GGCGCAAAAG AGGTGCCTTA TGATGAAATT 
ATTAAGGCGC TGAATATGCT GCATCAGGCG GGTGTTACAT CGGTGGGCTT AATGACCCAA 
CCGATATAA 

 

Protein sequence

MARVRGRKRR ELKSEINIVP LLDVLLVLLL IFMATAPIIT QSVEVNLPDA TDSKTVSSDD 
NPPVIVEVSG VGQYTVVVDH QRMELLPSEQ VVAEAQARLK TNPKTVFLIG GAKEVPYDEI 
IKALNMLHQA GVTSVGLMTQ PI