| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2869 |
|---|
| Symbol | tolA |
|---|
| ID | 5385746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3239145 |
|---|
| End bp | 3240311 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640865869 |
|---|
| Product | cell envelope integrity inner membrane protein TolA |
|---|
| Protein accession | YP_001401832 |
|---|
| Protein GI | 153949140 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3064] Membrane protein involved in colicin uptake |
|---|
| TIGRFAM ID | [TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000000082663 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTAAGG CAACCGAGCA AAATGATAAG CTGAATCGCG CCGTTATTGT TTCGGTGGTT
CTGCACATCA TATTGATTGC CCTGTTGATT TGGGGCTCTC TGACGCAGAC GACTGAAATG
GGCGGTGGCG GTGCTGGCGG CGAAGTGATT GACGCTGTAA TGGTCGATCC GGGTGCGGTG
ACAGAGCAAT ATAATCGTCA ACAGCAACAG CAAACAGATG CTAAACGTGC CGAGCAGCAG
CGTCAGAAAA AAGCTGAGCA GCAAGCCGAA GAATTGCAGC AAAAGCAGGC TGCTGAACAA
CAGCGGCTGA AAGAATTAGA AAAAGAGCGT CTGCAAGCGC AAGAAGATGC GAAGCTGGCT
GCTGAAGAGC AGAAAAAGCA AGTTGCTGAA CAACAAAAAC AAATCGCTGA ACAGCAAAAG
CAGGCCGCTG AACAACAAAA AATTGCTGCT GCTGCCGTTG CAAAAGCGAA AGAAGAGCAG
AAGCAGGCTG AAACGGCTGC GGCTCAGGCA AAAGCTGAAG CAGATAAAAT AGTGAAAGCG
CAGGCTGAAG CACAGAAAAA AGCCGAGGCT GAAGCCAAAA AAGAAGCGGC TGTTGCCGCT
GCGGCGAAGA AACAAGCCGA TGCCGATGCG AAGAAAGCGG TAGAGGTTGC CGAAAAGGCT
GCGGCTGACG CAGCAGAAAA GAAAGCGGCC GCAGATGCAG AGAAAAAAGC CGCTGCTGCT
AAAAAAGTTG CTGCCGCCGC TGAGGCCAAG AAAAAAGCGG CAGCAGAAGC GGCTGCCTCA
ACGGATGTTG ATGATTTGTT TGGTGGTTTG GCAAACGCTA AAAATGCACC GAAGAGTGGT
TCGGGTGCAG GTGCCGCTGC TGCCGGTAAA GGTGGCGGTA AGAAAAGCGG GGCATCAGGT
GCTGATATCA GCGGCTACCT GGGGCAAATC ACCGGCGCGA TACAAAGTAA ATTTTATGAT
GCAGATCTTT ACAAAGGCCG TACCTGTGAT TTGCGAATCA AATTGGCACC AGACGGTCTA
TTAATCGATG TGAAAGCAGA AGGGGGGGAC CCGGCACTGT GCCAGGCTGC TATCGCTGCG
GCAAAACAAG CGAAAATTCC TAAGCCTCCA AGTACGGATG TCTATGAACA ATTTAAGAAT
GCTCCGCTTG TGTTTAAGCC TCAATAA
|
|---|
| Protein sequence | MGKATEQNDK LNRAVIVSVV LHIILIALLI WGSLTQTTEM GGGGAGGEVI DAVMVDPGAV
TEQYNRQQQQ QTDAKRAEQQ RQKKAEQQAE ELQQKQAAEQ QRLKELEKER LQAQEDAKLA
AEEQKKQVAE QQKQIAEQQK QAAEQQKIAA AAVAKAKEEQ KQAETAAAQA KAEADKIVKA
QAEAQKKAEA EAKKEAAVAA AAKKQADADA KKAVEVAEKA AADAAEKKAA ADAEKKAAAA
KKVAAAAEAK KKAAAEAAAS TDVDDLFGGL ANAKNAPKSG SGAGAAAAGK GGGKKSGASG
ADISGYLGQI TGAIQSKFYD ADLYKGRTCD LRIKLAPDGL LIDVKAEGGD PALCQAAIAA
AKQAKIPKPP STDVYEQFKN APLVFKPQ
|
|---|
| |