| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2853 |
|---|
| Symbol | modF |
|---|
| ID | 5385580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3221251 |
|---|
| End bp | 3222741 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640865845 |
|---|
| Product | putative molybdenum transport ATP-binding protein ModF |
|---|
| Protein accession | YP_001401816 |
|---|
| Protein GI | 153947841 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGT TGCAAATATC GCAAGGTTGT TTTCGCCTGA GTGACACACA GACACTCATC
TTGCCAGCAC TACATATCCA GGCGGGTGAC TGTTGGGCAT TTGTCGGGGC CAATGGCAGT
GGTAAATCTG CGTTAGCCAA GGCCCTGTCT GGAGAGCTTA CCCTGCTGGA GGGCAGCCGC
CAAAGCCACT TCCGCCATGC CGTGCGTTTA TCATTCGAAC AACTACAGCA ACTGCTCAAT
GAAGAGTGGC AACGTAATAA CACCGACCTG CTCAGTGCTG ATGAAGATGA CACTGGCCGT
ACTACCGCCG AAATTATTCA GGAAGCGGCC CGTGACCCGC AGCGCTGTCA ACAACTGGCA
GCGCTATTTG GTATCAGCCA CTTGCTTTCT CGCCGCTTCA AATACCTTTC TACGGGGGAA
ACCCGTAAAA CATTGCTGTG TCAGGCGCTG ATGCCGCAAC CGGACCTGCT GATTCTGGAT
GAGCCCTTTG ATGGCCTGGA TGTCGCGGCT CGGGCGCAGT TAGCCGAGAT GCTATCCACA
CTTTCGGCCC AAGGCGTCAC CCTGGTATTG GTCCTCAACC GCTTTGATGA TATCCCTGAT
TTTGTGCAGT ACGTTGGCGT ATTGGCTGAT TGCCACCTGA CCCACATGGG GCCGCGCCAG
CAAATTCTGT CGGAAGCGTT AATTGCCCAA TTGGCACACA GTGAAAATCT GGATGGGCTG
TCACTGCCGG AAACGGAGGA TCCACAGCAC CACCTACGAA TACCGAAAAA TGAACCCTTG
ATCATACTGA ATGACGGGGT GGTGGAGTAC AACGACCGCC CTATCCTGCA TAACCTGAGC
TGGCAAGTGA ACCCCGGTGA ACACTGGCAG ATTATCGGCC AGAATGGTGC AGGGAAATCC
ACCTTACTCA GCCTGATAAC TGGCGACCAT CCCCAAGGAT ACAGTAATGA TTTAACGCTG
TTTGGCCGCC GCCGTGGCAG TGGTGAAACC ATCTGGGACA TCAAACGCCA TATTGGTTAT
GTCAGCGGCA GCCTCCATCT GGACTACCGG GTTAGCACCC GTGTACGTAC CGTGATTTTA
TCCGGTTTTT TCGATTCGAT TGGTCTTTAC CAAGCAGCCT CTGATCGTCA ACAACAATTA
GCAGATCAAT GGCTGTCTTT ACTGGGGTTT TCCACCTCCG TCGCCAACCA ACCTTTCCAC
AGCTTATCTT GGGGGCAACA GCGTCTGGTC TTGATCGCCC GAGCATTGGT TAAGCACCCA
GCGCTCCTGA TCCTGGATGA ACCCTTACAA GGGCTGGATC CGCTTAACCG TTTGTTAGTG
CGCCGTTTTA TTGATGTGAT GATCGGTGAA GGAGAAACCC AATTATTGTT CGTTTCTCAC
CATGCCGAGG ATGCACCCCA GTGTATTACG CACCGCTTAA CCTTTGTGCC ATTTGGCGAT
ATTTATCACT ATCAACAAGA AAAATTACCA AGCCAACCAC AGGTAAAATA A
|
|---|
| Protein sequence | MSELQISQGC FRLSDTQTLI LPALHIQAGD CWAFVGANGS GKSALAKALS GELTLLEGSR
QSHFRHAVRL SFEQLQQLLN EEWQRNNTDL LSADEDDTGR TTAEIIQEAA RDPQRCQQLA
ALFGISHLLS RRFKYLSTGE TRKTLLCQAL MPQPDLLILD EPFDGLDVAA RAQLAEMLST
LSAQGVTLVL VLNRFDDIPD FVQYVGVLAD CHLTHMGPRQ QILSEALIAQ LAHSENLDGL
SLPETEDPQH HLRIPKNEPL IILNDGVVEY NDRPILHNLS WQVNPGEHWQ IIGQNGAGKS
TLLSLITGDH PQGYSNDLTL FGRRRGSGET IWDIKRHIGY VSGSLHLDYR VSTRVRTVIL
SGFFDSIGLY QAASDRQQQL ADQWLSLLGF STSVANQPFH SLSWGQQRLV LIARALVKHP
ALLILDEPLQ GLDPLNRLLV RRFIDVMIGE GETQLLFVSH HAEDAPQCIT HRLTFVPFGD
IYHYQQEKLP SQPQVK
|
|---|
| |