| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2852 |
|---|
| Symbol | modE |
|---|
| ID | 5385624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3220350 |
|---|
| End bp | 3221141 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640865844 |
|---|
| Product | DNA-binding transcriptional regulator ModE |
|---|
| Protein accession | YP_001401815 |
|---|
| Protein GI | 153948149 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2005] N-terminal domain of molybdenum-binding protein |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCG AAATTCTTCT TACACTAAAA CTTCAACAGC GCCTGTTTGC CGATCCACGA
CGTATTGCGC TATTAAAGCA AATTCAGCAT ACCGGTTCCA TCAGCCAGGG GGCCAAGCTC
GCGGGTATCA GCTATAAAAG TGCCTGGGAT GCCATAAATG AAATGAATAC ACTGTCCGAG
GAGATACTGG TTGAGCGGGC CACTGGCGGC AAAGGGGGAG GGGGAGCACA TCTGACCCGC
TACGGTGAAC GCTTAATCCA GCTTTATGAT TTACTCGCGA CCATCCAGCA AAAAGCCTTT
GATACCCTGA AAGATGATTC ACTGCCGCTG GACAGCTTGC TGGCGGCAAT TTCCCGCTTT
TCACTGCAAA CCAGCGCCCG TAATCAATTT TTCGGTACCC TTATTGAACG CGACCACCAG
CAGGTGCAAC AGCATGTCAA TATTCTGCTA TCGGACGGCA AAACTCGCTT AACGGCGGCG
ATCACCCAGC AAAGTGCGGA TCGCCTGCAA CTTTCAGCAG GTAAAGAAGT GCTGGCATTG
ATTAAAGCAC CCTGGGTAAA ACTGGTTACC GATCCGGCAC TGGCAGGTGC AGCGGATAAC
GCATTGCCGG GAATGGTCGC CAGCATTGAG CCGGGCAACG ATCATAGCGA AGTTATTGTC
ACCTTAACTG GCGGGGCCAA CCTGTGTTCA ACCCAAAACA ACAGCGAACT CCATGCGCTG
AATTTACGGG TTGGCAGTGC CGTCATCGCA CAATTCAATG CAGATCGAGT GATTATCGCC
ACATTGTGTT GA
|
|---|
| Protein sequence | MQAEILLTLK LQQRLFADPR RIALLKQIQH TGSISQGAKL AGISYKSAWD AINEMNTLSE
EILVERATGG KGGGGAHLTR YGERLIQLYD LLATIQQKAF DTLKDDSLPL DSLLAAISRF
SLQTSARNQF FGTLIERDHQ QVQQHVNILL SDGKTRLTAA ITQQSADRLQ LSAGKEVLAL
IKAPWVKLVT DPALAGAADN ALPGMVASIE PGNDHSEVIV TLTGGANLCS TQNNSELHAL
NLRVGSAVIA QFNADRVIIA TLC
|
|---|
| |