| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2821 |
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| Symbol | |
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| ID | 5388528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3186545 |
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| End bp | 3188359 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640865813 |
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| Product | sensory box histidine kinase |
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| Protein accession | YP_001401784 |
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| Protein GI | 153948998 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGAAT CTAAAGGAAA ATCGAATTTA TTCTCTGTGA TCCCATACGG TTTTTTTGTT
GGTTTAGTGA TCATTTTGAT CGCCGTGATT ATCACTATGG CGATTAAGGA CCTGAATCGT
GGGCGCAACA TTGAATTTCA GACACTATTA GAAAAAAGCG CCGTATTGAT TCGTTCCTTT
GAATCCAGCT CGCGTACAGG CATGGGAATG AGTTGGCGTC AGCGTCAAAC ATTGATGGAA
GAGATGGCTT ACCAGCCTGG CGTTATCTAT ATTGCGGTTA CCGACCTATC AGGGAAAATC
CTTGCCCACA GTAACCCGGC ACGTGTCGGA ACGCAGCTCT ATAGCCCACA AGAGATGGCG
GATTTAAACG TTCAGTTAGC TGAACAGTGG CGGATAGCGG CTTTTCTTGA TGAGGATAAT
AAAAGTCAGG ATGCTTTTGA GGTCTATCGT TTCTTTAAGC CACTGAGACG CAATAATACC
CATCAGTCCC ATATGAATAT GGTGAGAAGG AGTAACGTTG CTGCGACTCA AGATAATAAT
GACAAATATG AAAATCAAAG TGTCATTTTT ACCGCCTTCG ACACTGAAGC GTTAGATGCG
ATGCAAGCAA AAGATATTCG CAATACGATT ATCTTTTTGT CTATTCTCAG TATGTTGGCT
CTGGCGGGTA TTCTGGCCCT ATTCTGGGCG CGCCGTTACC AGCTTTCCCG ACGCCAGCTA
CAAGACTCTA AAGCGATTTC AACCGAAATT ATCAATAATC TGCCTATTGG GTTGATTACC
ACCAATGAAG AGCAATTGAT CAGTGTCGTA AACCACACGG CAGAAAAGAT ATTCGGTATC
AGTAAAGATA TTCTGACCGG CCAAAATATT CACCAAGCCC TACCTCCAGA ATGGAATCTT
TTAGTTAAAA AAAGTCAACG CCATCAGCCA GTAATAGAGC ATGAAATTGA TTATAAATTA
AAAGAAGGCC TAATTATTCC ATTGAGCATT AGCGTGGCAA ATATTGTTAA TCACAATGGC
AGTTTCCTGG GCAATATATT CATCTTTCGG GACATGAGGG AGGTTCGGCA GTTACAAGAA
GAGATACGGC GCAAAGAAAA ACTGGCGGCC ATTGGCAATT TAGCCGCTGG TGTCGCGCAT
GAAATAAGAA ATCCGCTCTC TTCTATCAAA GGTTTTGCGA AATATTTTGA GGGGCATTCC
CCGCAAGGCA GTGAGGAGCA AGAATTAGCG AAAGTGATGA TAAAAGAGGT CGATAGGCTC
AATAGAGCGG TCACTGAGTT ACTGGGGTTA GTTCGCCCAT CGGATTTGAG GATCCAACTC
GTCAATATTA ACGAAATCAT TGCTCATTCA CTTCATCTTA TTCGTCAGGA TGCCGATAGC
AAAAAAATCA CAATTCAATT TATCAGCAAT GAAAACTTGC CACGAGTGGA AATAGATCCC
GATCGTTTCA CTCAAGCATT ACTCAACCTT TACTTAAATG CTATTCAGGC CATGGGGAGA
GCGGGGGCAC TTGAAATTGC CCTGGCGCTT GTCGAAGAGT CAAAATTACG AATTAGCGTA
ATCGATACGG GTAAAGGCAT TAGAGCAGAA GATCTGGAAA ACATCTTTAA CCCTTATTTC
ACGACGAAAG CTTCTGGCAC TGGTTTGGGC CTTGCTATCG TGCAAAAAGT GATTGAAGAG
CATCAAGGTA GAATTACCGT TACCAGCCAC CCGCAATCTG GAACCCGCTT TGACATGACA
ATCCCCTTGG TACAACGCGG CCAATATCGC CCAGATGGGC AAGAACAAAA GGCGTCGAAT
AATGACAACA CATAA
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| Protein sequence | MKESKGKSNL FSVIPYGFFV GLVIILIAVI ITMAIKDLNR GRNIEFQTLL EKSAVLIRSF
ESSSRTGMGM SWRQRQTLME EMAYQPGVIY IAVTDLSGKI LAHSNPARVG TQLYSPQEMA
DLNVQLAEQW RIAAFLDEDN KSQDAFEVYR FFKPLRRNNT HQSHMNMVRR SNVAATQDNN
DKYENQSVIF TAFDTEALDA MQAKDIRNTI IFLSILSMLA LAGILALFWA RRYQLSRRQL
QDSKAISTEI INNLPIGLIT TNEEQLISVV NHTAEKIFGI SKDILTGQNI HQALPPEWNL
LVKKSQRHQP VIEHEIDYKL KEGLIIPLSI SVANIVNHNG SFLGNIFIFR DMREVRQLQE
EIRRKEKLAA IGNLAAGVAH EIRNPLSSIK GFAKYFEGHS PQGSEEQELA KVMIKEVDRL
NRAVTELLGL VRPSDLRIQL VNINEIIAHS LHLIRQDADS KKITIQFISN ENLPRVEIDP
DRFTQALLNL YLNAIQAMGR AGALEIALAL VEESKLRISV IDTGKGIRAE DLENIFNPYF
TTKASGTGLG LAIVQKVIEE HQGRITVTSH PQSGTRFDMT IPLVQRGQYR PDGQEQKASN
NDNT
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