| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2813 |
|---|
| Symbol | |
|---|
| ID | 5386426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3177849 |
|---|
| End bp | 3179591 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640865805 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001401776 |
|---|
| Protein GI | 153948008 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAA TTCAACATAT CATTACTCTG GAGGCGGTTG AAAAACGGTT CAGCGGACTG
GATCACCCTG CGGTTGCCAG CCTGACTACG GAGATCCGCA GCGGAGCCGT GACGGGATTA
GTCGGGCCGG ACGGTGCCGG TAAAACCACG TTATTACGTA TGCTGGCCGG GTTGCTAAAA
CCCACTCAGG GTAAGATAAC CGTGGTCGGG CTAGATCCGT TGAAAGATGA TCGCCAGCTA
CATGCCATTC TCGGTTATAT GCCGCAGAAA TTTGGCCTGT ATGAAGATTT AACGGTCATG
GAAAACCTGT CGCTGTATGC CGATTTACGT GGCGTGACCG GTGAACTTCG GCGTCAGACA
TTTGAGCGCC TGCTGACATT TACCGATTTA ACCCGCTTCA CATCACGTCT GGCGGGTAAG
TTGTCGGGTG GCATGAAGCA AAAGTTGGGG TTAGCCTGTA CCTTGGTCGG CCAACCCAAA
GTGCTCCTCT TGGATGAGCC GGGGGTTGGT GTCGATCCCA TCTCTCGCCG TGAACTGTGG
CGCATGGTGC ATGAGCTGGC AGACGACGGC ATGCTCATTT TGTGGAGTAC CTCTTATCTG
GATGAAGCAG AACAATGTCG TGAAGTGTTG CTGCTTAATG AAGGCAAATT CCTGTACAGC
GGCGCACCAC AAACCCTGAC GCAGCGCATG AGCGGGCGGA CTATTTTGGT GGCCGCCCAA
CGTGGCACCA ATCGCCAGTT GCTACAACAT GCCCTGACCC TGCCCCAAGT CAGTGACGGG
GTGATCCAAG GTAAATATGT CCGGCTGATC CTTAAGCCAG ATGTCGATCA CAGCCAGTTA
TTACAATGGC TAAATCAACC CGATGCAGAA ATGAAGGAGG CGGAACCCCG TTTTGAAGAC
GCCTTTATTG ACCTGTTAGG TGGTGGCCCG GACAGCGAGT CCGCACTGGC AAAAATTATG
CCCAGAGTGG CTGGCAACCC TGGTGAAACC GTTATTGAAG CACAAGCGCT AACCAAGAAA
TTTGGCGATT TTGCCGCGAC TGACCATGTG AATTTTCAGG TTAAACGCGG TGAAATATTT
GGCCTGCTCG GGCCAAATGG AGCCGGTAAA TCCACGACGT TTAAAATGAT GTGTGGCTTA
TTGGTACCCA GTGATGGAAA AGCCTTAGTA CTGGGGATGG ATCTGAAAAC CAGCTCGGGT
AAAGCTCGCC AACATCTGGG CTATATGGCA CAAAAATTTT CGCTGTACGG TAACCTGACC
GTTGAGCAAA ACCTGAAATT TTTCTCCGGG GTTTATGGTC TGAAAGGCAA AACCCAGCGC
GACAAAATTG CCGATATGAT TTCGGCATTT AACTTCACCC CGATCCTGAA ACAAACACCG
GACTCCCTGC CATTAGGGTT TAAGCAGCGG CTTGCACTGG CCTGCGCCTT GATGCATGAG
CCAGATATCC TGTTTCTTGA TGAGCCAACC TCCGGTGTCG ATCCGCTCAC TCGCCGTGAA
TTCTGGTTAC ACATCAATGG AATGGTAGAC AAAGGCGTCA CCGTCATGGT GACCACCCAC
TTTATGGATG AAGCGGAATA TTGTGACCGT ATTGGGCTGG TTTATCGCGG CAAGATTATC
GCCGCCGGTA CGCCCGATGA ACTGAAACAA CAGGTTGCCA GTGATGATGA CCCCAATCCG
TCAATGGAAA CGGCGTTTAT CGAATTGGTT CTGCGTTATG ACCAACAGCA TGATAAGGAG
TAA
|
|---|
| Protein sequence | MNGIQHIITL EAVEKRFSGL DHPAVASLTT EIRSGAVTGL VGPDGAGKTT LLRMLAGLLK
PTQGKITVVG LDPLKDDRQL HAILGYMPQK FGLYEDLTVM ENLSLYADLR GVTGELRRQT
FERLLTFTDL TRFTSRLAGK LSGGMKQKLG LACTLVGQPK VLLLDEPGVG VDPISRRELW
RMVHELADDG MLILWSTSYL DEAEQCREVL LLNEGKFLYS GAPQTLTQRM SGRTILVAAQ
RGTNRQLLQH ALTLPQVSDG VIQGKYVRLI LKPDVDHSQL LQWLNQPDAE MKEAEPRFED
AFIDLLGGGP DSESALAKIM PRVAGNPGET VIEAQALTKK FGDFAATDHV NFQVKRGEIF
GLLGPNGAGK STTFKMMCGL LVPSDGKALV LGMDLKTSSG KARQHLGYMA QKFSLYGNLT
VEQNLKFFSG VYGLKGKTQR DKIADMISAF NFTPILKQTP DSLPLGFKQR LALACALMHE
PDILFLDEPT SGVDPLTRRE FWLHINGMVD KGVTVMVTTH FMDEAEYCDR IGLVYRGKII
AAGTPDELKQ QVASDDDPNP SMETAFIELV LRYDQQHDKE
|
|---|
| |