| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2808 |
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| Symbol | |
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| ID | 5387520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3171791 |
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| End bp | 3172729 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640865801 |
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| Product | tRNA-dihydrouridine synthase C |
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| Protein accession | YP_001401772 |
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| Protein GI | 153950443 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGTAA TACTGGCACC GATGGAAGGT GTATTAGATT CGCTGGTGCG TGAATTGCTC
AGTGAAGTAA ATGATTACGA CCTTTGCATC ACCGAGTTTT TGCGGGTGGT TGATCAACTG
CTGCCTGCTA AATCTTTCTA CCGCCTATGT CCTGAATTGC ACAATCAAAG CCGTACCCAG
TCTGGCACAT TAGTACGTAT CCAATTATTA GGCCAATACC CAGAGTGGCT GGCAGAAAAT
GCGGCTCGAG CGGTAGCGCT TGGTTCATAT GGTGTTGATC TCAATTGCGG GTGTCCTTCA
AAACTGGTTA ACGGCAGTGG CGGCGGGGCA ACCTTGCTAA AAGATCCAGA ACTGATTTAT
CAAGGTGCAA AAGCCATGCG TGCGGCTGTT CCGGCCCATC TCCCCGTCAC GGTAAAAATT
CGTTTAGGTT GGGATTCTGG TGATCGCCAA TTTGAAATTG CTGATGCCGT GCAGCAAGCG
GGGGCGACCG AATTGGCTGT TCATGGTCGA ACCAAAGAAG ATGGCTATCA AGCTGAACGG
ATTAACTGGC AAGCCATTGG TGAGATTCGC CAGCGCCTGA CGATTCCAGT TATTGCTAAT
GGTGAAATTT GGGATTACCA GAGCGCACAA GAGTGCATGA AAGTGACCGG TTGTGATGCC
GTGATGCTAG GCCGTGGCGC GCTGAATGTG CCTAATCTGA GCCGGGTGGT GAAGTATAAC
GAACCGCGTA TGCCGTGGCT GGAAGTGGTC AAACTACTGC AAAAATATGT GCAGTTGGAA
AAGCAGGGCG ATACCGGATT GTATCATGTT GCGCGCATCA AACAGTGGTT GGGGTATCTA
CGTAAAGAAT ATACCGAAGC GACAGATTTA TTCGGTGAAA TCCGCGCATT AAAAAACTCG
AAGGATATTG CGCTGGCAAT TCAGCGTATT AATCGTTAA
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| Protein sequence | MRVILAPMEG VLDSLVRELL SEVNDYDLCI TEFLRVVDQL LPAKSFYRLC PELHNQSRTQ
SGTLVRIQLL GQYPEWLAEN AARAVALGSY GVDLNCGCPS KLVNGSGGGA TLLKDPELIY
QGAKAMRAAV PAHLPVTVKI RLGWDSGDRQ FEIADAVQQA GATELAVHGR TKEDGYQAER
INWQAIGEIR QRLTIPVIAN GEIWDYQSAQ ECMKVTGCDA VMLGRGALNV PNLSRVVKYN
EPRMPWLEVV KLLQKYVQLE KQGDTGLYHV ARIKQWLGYL RKEYTEATDL FGEIRALKNS
KDIALAIQRI NR
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