| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2793 |
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| Symbol | |
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| ID | 5384580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3157444 |
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| End bp | 3158991 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640865786 |
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| Product | hydrophobic amino acid ABC transporter permease |
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| Protein accession | YP_001401757 |
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| Protein GI | 153950567 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGTC TGTTACTGGG CTTATCGATG TCGGCAATGG CAGGGCCAGC ACAGGATTTT
GTTGCGGCGA ATCGTGCACA GCAGGCCACA TTATTACAAC AGTGGGCAAC GGAACCTGAT
GCTAGCCGAT TACCTCTTTT GCAGGCGCTA AAACAAGAAA CAGTAGTGGT AGACAGTGCC
GGCCAAGCGT TTATTAAAAA TAATCAAAGT ATTAATTCGC TGGAAGGCCA ATCGCAACCG
ACCGGTACGC TGAAAAAAAT CTGGCTCAAC AACCGGTTAC GTATCTTGAT CGCCAATGCC
CTGGCGGCAC AACGCTTAGT CAGTGACGAT GAAACCGTGC GTTTACAGGC GGCAGTTGAA
TTACAACGGC AGGCACAGAG CGATCAACTA CCGCTGCTGA ATCAACGCCT GAAGTTGGAA
ACGGACAGTC AGGTAAAAGA GGCATTGAGC ATTGCACTCG CCAATTTACA ACTGACGGAC
AGTAATCCGC AGGTGCGTCT GAATGCCGTG CAATTGTTGG GGCAATCAGG TTCACCGCAA
ACTCAATCAC GGCTGCAAAG TTTAACCGAT ACGCAGGTTG AACCGAATGA ACAGGTCCGA
GCCGCAGCAG CCACCAGTTT GAAACAGATA CAACATCGGT TGATGATTGG GGAGGTTATT
GGGCAGGTAT TTAGCGGACT ATCATTGGGT TCAATCTTAT TGCTGGCGGC ATTGGGGTTA
GCTATCACCT ATGGCTTACT GGGGGTGATC AATATGGCGC ATGGTGAAAT GCTGATGTTG
GGAGCCTATT CCGCCTATCT GGTGCAATCG CTATTCCAAC AATTTGCCCC ACACTGGCTG
GCACTTTATC CATTAATCGC TCTACCGGTT GCGTTCTTTA TTACTGCGGG CATTGGTATG
GCGTTGGAAC GCACGGTGAT TCGGCATCTG TATGGCCGCC CGTTGGAAAC ACTGCTAGCG
ACGTGGGGGA TCAGCCTGAT GTTGATTCAG GGGATCCGCA TGTTGTTTGG CCCACAGAAT
TTGGAAGTTG CTAACCCTGC ATGGCTGTCC GGTGGGGTTC AGGTTTTACC TAATCTGGTT
TTACCGTGGA ATCGGATCGC GGTGATTGCA TTTGTCATTA TTGTTTTGCT ACTCACATGG
TTGCTGCTGA ATAAAACCCG CCTTGGTCTG CAAGTCCGTG CAGTGACACA AAATCGGGCA
ATGGCGGCCT GCTGCGGAGT GGCTACGGGG CGGGTTGATA TGCTGGCATT CGGTTTGGGT
TCTGGTATTG CAGGGCTTGG CGGTGTAGCA CTCTCGCAAT TGGGCAATGT CGGCCCGGAA
TTAGGGCAGG GTTATATCAT CGACTCCTTC TTGGTGGTGG TCCTGGGTGG CGTCGGGCAA
TTAGCTGGCA GTGTGGTTGC CGCATTAGGG CTGGGGATGT TGAATAAAAT TTTGGAACCA
CAAATTGGCG CAGTATTGGG CAAAATCCTG ATTTTAGTGC TGATCATTTT ATTTATTCAA
AAACGACCGC AGGGTCTGTT TGCCCTTAAG GGCAGGGTGA GTGACTAA
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| Protein sequence | MIGLLLGLSM SAMAGPAQDF VAANRAQQAT LLQQWATEPD ASRLPLLQAL KQETVVVDSA
GQAFIKNNQS INSLEGQSQP TGTLKKIWLN NRLRILIANA LAAQRLVSDD ETVRLQAAVE
LQRQAQSDQL PLLNQRLKLE TDSQVKEALS IALANLQLTD SNPQVRLNAV QLLGQSGSPQ
TQSRLQSLTD TQVEPNEQVR AAAATSLKQI QHRLMIGEVI GQVFSGLSLG SILLLAALGL
AITYGLLGVI NMAHGEMLML GAYSAYLVQS LFQQFAPHWL ALYPLIALPV AFFITAGIGM
ALERTVIRHL YGRPLETLLA TWGISLMLIQ GIRMLFGPQN LEVANPAWLS GGVQVLPNLV
LPWNRIAVIA FVIIVLLLTW LLLNKTRLGL QVRAVTQNRA MAACCGVATG RVDMLAFGLG
SGIAGLGGVA LSQLGNVGPE LGQGYIIDSF LVVVLGGVGQ LAGSVVAALG LGMLNKILEP
QIGAVLGKIL ILVLIILFIQ KRPQGLFALK GRVSD
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