Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2791 |
Symbol | |
ID | 5385956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3155535 |
End bp | 3156371 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865784 |
Product | hydrophobic amino acid ABC transporter ATP-binding protein |
Protein accession | YP_001401755 |
Protein GI | 153947706 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGT TTCAACTGAC GGAGCAACTG ATTTACGCCG AGATAAATGT TCAGGAGCCT GGAACGATAC AGCATGCGGC TGATCAATAT CGCCAGCAGC GCGATCCGGT ACTGACGCTG GAAAACATCA ACGTCAGCTT TGATGGTTTT CATGCGTTAC GTAATCTTTC ATTACAAATC GGTGTTGGGG AGTTGCGTTG TATCATTGGC CCGAATGGGG CGGGGAAAAC CACACTGATG GATGTGATCA CCGGTAAGAC GCGGCCACAA ACAGGCAAGA TGGTGTATGA CCAACACCAT GATCTTTCCA CCATGAATAC CATTGAGATT GCTCATGCCG GTATTGGGCG AAAATTCCAG AAACCCACGG TATTTGAGGC CTTGAGTGTC TTTGAAAATT TAGAACTGGC ACAAAAAAAC CATAAAACGG TGTGGGCCAG CTTGTGCGCC AAACTCAACA GTGAACAACG GGATCAGATT GATGAAACGC TGGCCATATT GCGTTTAAGT GATCTGCGGC AGCGGCAAGC GGGGTTGTTA TCCCACGGTC AAAAGCAGTT TCTTGAGATT GGTATGTTGT TGGTACAAGA CCCGCATCTA TTGTTATTAG ATGAGCCAGC CGCAGGAATG ACTGATGCCG AGACGGCGTA TACTGCTGAG TTGTTTAATC AGTTGGCGGG TAAGCACTCG TTAATGGTGG TGGAACACGA TATGGGGTTT ATCGAGACGA TTGCTGATCA TGTCACTGTG TTGCACCAAG GGCAGGTGTT GGCCGAGGGA TCACTGGCAG AGGTACAGGA GAATGATCAG GTGATTGAGG TGTATTTAGG GCGTTGA
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Protein sequence | MSRFQLTEQL IYAEINVQEP GTIQHAADQY RQQRDPVLTL ENINVSFDGF HALRNLSLQI GVGELRCIIG PNGAGKTTLM DVITGKTRPQ TGKMVYDQHH DLSTMNTIEI AHAGIGRKFQ KPTVFEALSV FENLELAQKN HKTVWASLCA KLNSEQRDQI DETLAILRLS DLRQRQAGLL SHGQKQFLEI GMLLVQDPHL LLLDEPAAGM TDAETAYTAE LFNQLAGKHS LMVVEHDMGF IETIADHVTV LHQGQVLAEG SLAEVQENDQ VIEVYLGR
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