Gene YpsIP31758_2786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2786 
Symbol 
ID5384709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3149676 
End bp3150608 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content48% 
IMG OID640865779 
Productquaternary amine ABC transporter substrate-binding protein 
Protein accessionYP_001401750 
Protein GI153949609 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGT TCCTAACTCG TAGCCGGATT TTTGCAGTGG CTGCTATCAT GCTGTCTGCA 
TCGAGTGGTA TATCGCACGC GGCAGATAAC GTCCGTGTAG GCTCTAAAAT TGATACCGAA 
GGCTCCTTGC TGGGCAATAT TATTGTGCAG GTTTTGGAGG CTAACGGGAT TAAAACCACC 
AATAAATCCC AACTGGGAGC AACCAAAGTC GTACGTGGGG CGATTACTGC CGGTGAGATT 
GATATTTATC CTGAATATAC GGGGAATGGG GCTTTCTTCT TTTCTGATGA ACAAGATCCT 
GCCTGGAAGA GCGCCAAAGC GGGCTATGAG AAAGTAAAAG CACTGGATTA CGAAAAAAAT 
AAATTGGTAT GGCTCTCTCC CGCGCCAGCG AACAATACCT GGACCATTGC TGTACGAAAA 
GACTTAGCCA CGGCCAATAA TTTGCGAACG CTGGATGATT TAGGTAAGTG GATCAATGGC 
GGAGGTCAGT TTAAATTAGC CGCCTCAGCC GAGTTTATCG AGCGGCCTGA TGCGTTACCC 
GCTTTCCAAC AGGCGTATGG TTTTACGCTG AATCAAGATC AACTACTGTC CCTGGCTGGG 
GGAGATACCG CTGTGACGAT TAAAGCGGCA GCAGAACAGA TCTCAGGAGT GAATGCCGCC 
ATGGCTTATG GTACCGATGG TCCTGTAGCG GCACTGGGTT TACAGACTCT GGAAGATACT 
AAAGGCGTGC AGCCGATTTA TGCGCCAGCT CCAATCATCC GTGAAGTTAC TCTGAAAGCT 
CACCCGAACA TCCCGGCTTT GCTTAATCCG GTATTCGCCA CACTGGATGG CCCAACGTTA 
CAAAAGCTGA ATGCACGTAT TGCGGTGGAA GGGCAGGATG CAAAGAAAGT GGCTGCCAAT 
TATCTAAAAG ATAACGGATT TATTAAAAAC TAA
 
Protein sequence
MALFLTRSRI FAVAAIMLSA SSGISHAADN VRVGSKIDTE GSLLGNIIVQ VLEANGIKTT 
NKSQLGATKV VRGAITAGEI DIYPEYTGNG AFFFSDEQDP AWKSAKAGYE KVKALDYEKN 
KLVWLSPAPA NNTWTIAVRK DLATANNLRT LDDLGKWING GGQFKLAASA EFIERPDALP 
AFQQAYGFTL NQDQLLSLAG GDTAVTIKAA AEQISGVNAA MAYGTDGPVA ALGLQTLEDT 
KGVQPIYAPA PIIREVTLKA HPNIPALLNP VFATLDGPTL QKLNARIAVE GQDAKKVAAN 
YLKDNGFIKN