Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2760 |
Symbol | |
ID | 5388116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3112149 |
End bp | 3112760 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640865752 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001401724 |
Protein GI | 153950640 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000000891417 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTCTT TTGAAATTGA TATTTCTACT ATTGCAACTT TACCCGCCCA ACAGAGGATC CTCTTAACAG CCCATCGTCT ATTTTATCAA GAAGGGATCC GTGCCACTGG TATTGACAAA ATAATTAAAG AATCGGGTGT CACTAAAGTC ACTTTTTATC GACATTTTCC CAGTAAAAAT GATTTGATTA GCGCGTTTCT TGAATATCGG CATCAACGGT GGATTAACTG GTTTATCGAA GAACTTAAAC AGCAAACCCT GCATCACGCA AATTTAGCCT TGGCATTAAC GAAATGCATG GCAAGCTGGT TTGAGCACCC GAGTTTTCGC GGTTGCGCTT TTATCAATAC CACAGTAGAA CTGGGTGGGT TATTGCCGGA AATACGCGAA CGTGCTTATC AGCATAAAAA GCAAATGGCG CAAGAGATAA GCCGATATTT ACCACAAGAT GATCAATGTG AGATCCGCAG TGAAATCATC ACGATGGTGT TAGATGGTGC GATCGTAAAA GCCCAGAGAG AATTAGATTT TTCGGCAGCC TTAACACTAA TACACAGTAC ATTGCAGGCC TTAGAGCCGC AGTGGATCAC AATAAGAAAC GCGGCCGAAT GA
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Protein sequence | MMSFEIDIST IATLPAQQRI LLTAHRLFYQ EGIRATGIDK IIKESGVTKV TFYRHFPSKN DLISAFLEYR HQRWINWFIE ELKQQTLHHA NLALALTKCM ASWFEHPSFR GCAFINTTVE LGGLLPEIRE RAYQHKKQMA QEISRYLPQD DQCEIRSEII TMVLDGAIVK AQRELDFSAA LTLIHSTLQA LEPQWITIRN AAE
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