Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2747 |
Symbol | |
ID | 5385887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3098995 |
End bp | 3099690 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865738 |
Product | putative aldolase |
Protein accession | YP_001401712 |
Protein GI | 153949402 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.339118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAGCCGC CACCAGCGTC AAAACTGTCA CCACCTGCCA AACAAGTACC CTTTTCGGAG CAACAAGTGC GTGATGATTT GGTGAACTAC GCCCGCTCAT TATTCCAACG GGGGTTGAGC AGTGGGGGTT CCGGCAATAT TAGCGTCAAG CTGCCTGACG GTAGCTTTCT GGTCACTCCG ACCAATTCCT GCCTGGGTGA ATTGGATAGC CAAACACTGA GTAAACTCGA TGCCGAGGGG AACCACATCA GCGGTGACAA ACCGTCGAAA GAGGTGCCGA TGCATTTGGC AATGTACCGT GCCAGATCCA CGTGCGGGGC GGTGGTTCAT TTGCACTCAC CGTATCTGAC CGCCTTGTCA TGTCTCACAA ATATTGATCA TACGAATTGT TTGCCCCCCA TTACACCTTA CTATGTAATG CGCATCGGGC GTCTTCCTTT GTTGTCTTAT ATGAAACCCG GCGATCCGGC CATTGCCACC GCCCTTGCCG ATACCGCACG CGATCACAAT GCCGTTTTGC TGGCGAACCA TGGCCCGGTT GTCAGTGGTT CAACGCTGCG GGAAGCGGTG TTCAACGCGG AAGAACTTGA AGATACGGCA CGGCTCTATT TTCTGATAAA GCCTTATGAT TACAGTCAAT TAACAACCTC ATCCATTGAT GAGTTGGCTC AATCGTACCG CAACAAAATA GGATAA
|
Protein sequence | MEPPPASKLS PPAKQVPFSE QQVRDDLVNY ARSLFQRGLS SGGSGNISVK LPDGSFLVTP TNSCLGELDS QTLSKLDAEG NHISGDKPSK EVPMHLAMYR ARSTCGAVVH LHSPYLTALS CLTNIDHTNC LPPITPYYVM RIGRLPLLSY MKPGDPAIAT ALADTARDHN AVLLANHGPV VSGSTLREAV FNAEELEDTA RLYFLIKPYD YSQLTTSSID ELAQSYRNKI G
|
| |