Gene YpsIP31758_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2725 
Symbol 
ID5388467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3080169 
End bp3081317 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content48% 
IMG OID640865716 
ProductHNH endonuclease domain-containing protein 
Protein accessionYP_001401690 
Protein GI153946874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.881817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCA ACCTGCCCGG AATGTATTTG TATTACCTTT CAAGAGATAA TTTAGCCCCT 
GAAGAATACG AGCGGATAAT CAGCCCTCAC GCTGCCTGGG CGCGTATCTG CCGCGAATAT
GAATTTGACG ACAGTCACAA TACCCGCCGT TACCTTATCA ATATGCGGGA ACGTGAACAG
CGCTCATCTC CAGATCAGCC ACGTCCAGGC GGGATACGTG AAAAAGAGAA ACTGGAAAAA
TTGGTTTTTT CGGGTGACGT GGTGATGTTA AGTGATCTGT ACGGCCCCGC CCGGCTGTTC
TACATCAATG GCGAAGGTCA GTTGATGTCT GCCGATCCCC ATGCTTTCCG TTTCGAGGGT
GCCGCAAAGA TTATCAAGGC ATTTGACGAT TCGGTGAAAT GTCGGAACTA TCAGCGAACG
GGTGGAAAGC CACGGCCAAC GAAGTCGCCA ATGAAGGTGA GGCCTTCTGT GTCTGAACTG
CCGGTACCGA AAGCATTCGG CACGATTAAC AGCAAGGCTG CGGGCCGGCT GCTTGCTGCG
GGTGGTGTGT ATAACCAGAA CCCGGAAATG TTTGCTGATA CCGCTAAAAA ACTGGGTGGC
GATGCGGCGG AAGGGTTTGA TCAGGTGCTG AATGAACAGA GTGCTGGCTC GCTGGTGGCA
TTGTCATCCA TGGTCATGCT GGGTCGAGCC TCCGTTGCTG GGCGGCCAAG CGTAGCTAGC
CTGGGAGAGT TGAAAAATTA TTTAGGCAAG ACAAAGGGTG AACAGAAATT ACTCAATAAT
ATAGACGTTA TTAAAATGGA TTATATTCGT CGTGACCGTG CGGAACTTAT CACAATGCGC
GGGCAGTTCA GGGGGATGAG GAGTAAATTC TTAAAATCAA TCTCCGATAA CCCAGAAGTG
AAAAAACGTT TTGATAGTGC GACTCTGGCA GATTTGGCAA ATGGCAAGGC CCCGAAAGGT
TGGGATGTGC ACCATAAGCT ACCGCTCGAC GATAGCGGAA CCAATGATGT TGGTAATCTG
GTACTCATTA AAAGAGATTT TGAACACAAC CTTTTTACGA ATACGCAAAG CAATATAACC
CGTCAAATTG GGACTAATGG AGCCAAAGAG ATTTTATGGC CTGTTCCGAA AGGTGTGATT
TATCCATAA
 
Protein sequence
MSFNLPGMYL YYLSRDNLAP EEYERIISPH AAWARICREY EFDDSHNTRR YLINMREREQ 
RSSPDQPRPG GIREKEKLEK LVFSGDVVML SDLYGPARLF YINGEGQLMS ADPHAFRFEG
AAKIIKAFDD SVKCRNYQRT GGKPRPTKSP MKVRPSVSEL PVPKAFGTIN SKAAGRLLAA
GGVYNQNPEM FADTAKKLGG DAAEGFDQVL NEQSAGSLVA LSSMVMLGRA SVAGRPSVAS
LGELKNYLGK TKGEQKLLNN IDVIKMDYIR RDRAELITMR GQFRGMRSKF LKSISDNPEV
KKRFDSATLA DLANGKAPKG WDVHHKLPLD DSGTNDVGNL VLIKRDFEHN LFTNTQSNIT
RQIGTNGAKE ILWPVPKGVI YP