Gene YpsIP31758_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2712 
Symbol 
ID5386940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp3066018 
End bp3067118 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content48% 
IMG OID640865702 
ProductABC transporter, permease protein 
Protein accessionYP_001401677 
Protein GI153948125 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGCAT ATCTATTACG GCGACTATTC CTTGTTATTC CTACGCTGTG GGCCATTATT 
ACTATCAATT TCTTTATTGT GCAGATTGCA CCTGGCGGGC CAGTTGATCA GGCTATCGCC 
AATATTGAAT TGGGTCACAC CACTGGATTT ACTGCCGGTA GCGGTGATGG CGGTTTAGGA 
GGGGCTAAAG CCGGTCTGAA TGCAGCACAG GTCGGTGACA GTAATTATCG CGGTTCACGC 
GGATTAGACC CGGAAGTTAT TGCTGAAATA AAACAGCGCT TTGGTTTTGA TAAGCCCCTA 
CATCAACGCT ATTTCGATAT GCTATGGCGC TATGTCCGTT TTGATTTTGG CGACAGTTTG 
TTCCGTGGCG AATCGGTGAT GTCACTGATA AAACAAAGCC TGCCGGTGTC AATCTCGCTT 
GGGCTATGGA GTACGCTGAT TATTTATCTG GTTTCCATAC CTCTGGGGAT AAAAAAAGCG 
GTGCGCAATG GCACCGCCTT CGATACCTGG AGCAGCACCT TAATTATCAT CGGTTATGCA 
ATCCCCTCGT TCCTATTCGC TATTTTACTG GTAGTGCTGT TTTCCGGTGG GAGCTATTTC 
GACCTATTCC CACTCCGCGG TCTGGTTTCC AGTAACTGGG ACACCCTACC GTGGTACAGC 
AAAATCACAG ACTATTTGTG GCATATTACC CTGCCCGTGC TGGCCACGGT GATTGGTGGT 
TTCGCGACAC TGACGATGCT AACGAAAAAC TCATTCCTCG ATGAAATACG TAAGCAATAT 
GTCGTTACGG CCCGCGCCAA GGGACTACCA GAGGAAAAAA TTCTCTATCG CCATGTCTTT 
CGTAACGCCA TGCTGTTAGT CATCGCCGGA TTCCCCGCCA CCTTTGTCAG TATGTTTTTC 
ACGGGTTCAC TCTTGATTGA AGTGATGTTC TCACTCAATG GCTTAGGCCT GCTGGGATAC 
GACGCCACCA TACAGCGAGA TTACCCGGTA ATGTTTGGCA CGCTCTATAT TTTCACACTC 
ATTGGTTTAC TGCTGAATAT CGTCAGTGAC ATTACCTATA CCCTGGTAGA CCCACGTATT 
GATTTTGAGG GCCGCCAATA A
 
Protein sequence
MGAYLLRRLF LVIPTLWAII TINFFIVQIA PGGPVDQAIA NIELGHTTGF TAGSGDGGLG 
GAKAGLNAAQ VGDSNYRGSR GLDPEVIAEI KQRFGFDKPL HQRYFDMLWR YVRFDFGDSL 
FRGESVMSLI KQSLPVSISL GLWSTLIIYL VSIPLGIKKA VRNGTAFDTW SSTLIIIGYA 
IPSFLFAILL VVLFSGGSYF DLFPLRGLVS SNWDTLPWYS KITDYLWHIT LPVLATVIGG 
FATLTMLTKN SFLDEIRKQY VVTARAKGLP EEKILYRHVF RNAMLLVIAG FPATFVSMFF 
TGSLLIEVMF SLNGLGLLGY DATIQRDYPV MFGTLYIFTL IGLLLNIVSD ITYTLVDPRI 
DFEGRQ