| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2711 |
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| Symbol | |
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| ID | 5388049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3064200 |
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| End bp | 3066008 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640865701 |
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| Product | ABC transporter, periplamic substrate-binding protein |
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| Protein accession | YP_001401676 |
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| Protein GI | 153949536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAC GCCTATTTGC TACCTTGATA CTTTCGGCCA TGAGTTTTGG GTTAGCTGCC
GAAACCATTA AAGAGGGCGT TTCTTTTGCC ATATTGGGCG ACCCCAAGTA CTCATCGGAT
TTTAGCCATT TTGATTATGT CAATCCAGCG GCCCCTAAAG GGGGAAATAT TACTCTGTCG
GCGATTGGCA CATTTGATAA TTTCAACCGG TATGCATTGC GTGGTACCTC TGCAGCTCGA
ACGGAGAGAC TCTATGATTC ATTGTTCAGT CCCTCAAGCG ATGAGATTGG CAGCTACTAT
CCATTAATTG CGGAATCAGC GCGCTATTCT CCCGACTTCA GTTGGATTGA GGTTGATATC
AACCCCCACG CCCGTTTTCA TGATGGTGCC CCGATTACTG CCGAGGATGT GGCCTTCACC
TTCAACAAAT TTATGACTGA AGGGGTACCA CAATTTCGAT TGTTCTATAA AGGCGTTAAA
GTCAACGCTA TTTCCCGTCT GACGGTACGT TTTGAATTTC CTGAACCTAA CAAAGATAAA
ATGCTCGGCC TACTTGGTTT CCCGGTGATG CCCAAACATT TCTGGAAAGA TCATAAGCTG
AGTGACCCAC TCAGTACCCC TCCAGTCGCC AGCGGCCCTT ACCGCATCAG CAAATACAAA
ATGGGCCAAT ATGTCACTTA TGAACGGGTA AAAGATTACT GGGCCGCCAA TCTGCCGGTT
AACCGGGGCC AATATAATTT TGACACTATC CGTTATGATT ATTATCTGGA CGACAAAGTC
GCCTTAGAAG CCTTTAAAGC CGGAGCCTTT GATTTACGGA CGGAGTCCTC ACCGAAAAGC
TGGGCGACGC AGTATGCAGG CGGTAACTTC GCCAAGAACT ATATCGTCAA ACAGGATATT
ACCGACAACT CGGCACAGAA CACTCGCTGG TTAGCATTTA ATGTGCAACG GCCCCTCTTC
AGTGACCGGC ACGTCCGCCA GGCGCTGACT TTGGCCTTTG ATTTTGAATG GATGAACAAA
GCCTTTTATT TCAATAGCTA TCAGCGTGCC AATAGCTTCT TCCAAAATAC CGAATATGCG
GCAACAGGTT ATCCGGACAG TGCAGAACTG GCTTGGCTCG CGCCATTGAA AGATAAAATA
CCCGCGGAAG TTTTCACCCA GATTTATCAA CCACCACACA CGGATGGTAG CGGCTATTCG
CGAGATAACC TGCTCAAAGC CAAAGAGTTA CTGAATGAAG CGGGCTGGGA AGTCAAAGAC
CAACAACTGG TGAATAGTAA AACCGGTAAA CCTTTTGAAT TTGAATTGCT ATTACCCAGC
GGCAGCGATT TTCAGTATGT GCAACCGTTC AAACACAATT TGCAGCGTTT AGGTATCACG
ATGAAGATCC GCGAAGTTGA CAGCTCGCAG TTTATTAATC GCTTACGCAG CCGGGATTTC
GATATGATCC CAACGGTTTA CAACGCCTTC CCTTACCCAA GCCCAGACCT GCAAATCTTG
TGGAGTTCAG CCTACATTGA TTCCACCTAT AACAGACCCG GTATTAAAGA TCCGGCCATC
GACCAATTAA TCGCCCAGAT TGTCAGCCAT CAGGATCAAC CAGAGGCCTT ACTCTCTCTG
GGGCGTGCCC TTGACCGGGT ATTGACCTGG AATTATTTGA TGATCCCGAT GTGGTATTCC
AATCATAGCC GCTTCGCCTA TTGGGATAAA CTCTCGATGC CAGCGGTTCG TCCCACCTAT
TCGCTAGGGT TTGATAGCTG GTGGTTTGAT GTTAACAAGG CAGCTCGCCT GCCAGTAGAA
CGTCGTTAG
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| Protein sequence | MFLRLFATLI LSAMSFGLAA ETIKEGVSFA ILGDPKYSSD FSHFDYVNPA APKGGNITLS
AIGTFDNFNR YALRGTSAAR TERLYDSLFS PSSDEIGSYY PLIAESARYS PDFSWIEVDI
NPHARFHDGA PITAEDVAFT FNKFMTEGVP QFRLFYKGVK VNAISRLTVR FEFPEPNKDK
MLGLLGFPVM PKHFWKDHKL SDPLSTPPVA SGPYRISKYK MGQYVTYERV KDYWAANLPV
NRGQYNFDTI RYDYYLDDKV ALEAFKAGAF DLRTESSPKS WATQYAGGNF AKNYIVKQDI
TDNSAQNTRW LAFNVQRPLF SDRHVRQALT LAFDFEWMNK AFYFNSYQRA NSFFQNTEYA
ATGYPDSAEL AWLAPLKDKI PAEVFTQIYQ PPHTDGSGYS RDNLLKAKEL LNEAGWEVKD
QQLVNSKTGK PFEFELLLPS GSDFQYVQPF KHNLQRLGIT MKIREVDSSQ FINRLRSRDF
DMIPTVYNAF PYPSPDLQIL WSSAYIDSTY NRPGIKDPAI DQLIAQIVSH QDQPEALLSL
GRALDRVLTW NYLMIPMWYS NHSRFAYWDK LSMPAVRPTY SLGFDSWWFD VNKAARLPVE
RR
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