Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2707 |
Symbol | spr |
ID | 5385110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3061368 |
End bp | 3061952 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865697 |
Product | putative outer membrane lipoprotein |
Protein accession | YP_001401672 |
Protein GI | 153947899 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAGT CTCAACCTAT TCTGAGATAT ATTCTGCGGG CGCTCCCTGC AGTTGCAGCA GCAGTAATGT TATCCGCATG CAGTTCACCA CAGGCTTCGA ATGTAAATAA TACGCAAACT GAGATGCGTG CAGTTAATGA CAAAGATGGG CTTTTACTGC AAGCCTCTCA GGATGAATTC GAAGCGATGG TTCGCAACGT TGACATCAAG TCAAAGATTT TAGAACAGTA TGCAGGTTGG AAAGGTGTTC GTTATCGTTT AGGCGGTAGC AGTAAACGCG GTATTGATTG TTCCGCATTT GTACAAACCA CTTTCCGTGA ACAGTTTGGT ATGGATTTGC CGCGCTCAAC ATCTCAGCAG CAGGATCTCG GCAAGAAAGT CCAGCGGACT AAATTACGTC CAGGTGATCT TGTTCTATTC CGCGCAGGCT CAACAGGGCG TCATGTCGGT ATCTATTTAG GTAACGATAA ATTTGTTCAT GCATCGACCA GTGCCGGTGT AACGATATCG AACCTGAATG ACGATTACTG GAATAAGCGT TATCGTGATG GGCGTCGAGT GCTAAGTAGC AGTTCGAGCA GCTAG
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Protein sequence | MVKSQPILRY ILRALPAVAA AVMLSACSSP QASNVNNTQT EMRAVNDKDG LLLQASQDEF EAMVRNVDIK SKILEQYAGW KGVRYRLGGS SKRGIDCSAF VQTTFREQFG MDLPRSTSQQ QDLGKKVQRT KLRPGDLVLF RAGSTGRHVG IYLGNDKFVH ASTSAGVTIS NLNDDYWNKR YRDGRRVLSS SSSS
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