| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2699 |
|---|
| Symbol | uxuA |
|---|
| ID | 5386374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3054204 |
|---|
| End bp | 3055397 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640865689 |
|---|
| Product | mannonate dehydratase |
|---|
| Protein accession | YP_001401664 |
|---|
| Protein GI | 153947359 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1312] D-mannonate dehydratase |
|---|
| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAA CATGGCGTTG GTATGGCCCG AATGATCCGG TGTCGTTAGA TGATATCCGT
CAAGCGGGTG CTACCGGAGT AGTCACGGCG TTACACCATA TCCCGAATGG TGTTGTGTGG
CCAGTCAGTG AGATCAAGCA GCGTCAGGCC GAATTAGCAG CTAAAAACCT GGTATGGTCT
GTTGTGGAAA GTGTGCCTAT TCATGAGGAC ATCAAAACTC ATAGCGGTAA CTATCAGCAA
TACATTGAAA ATTACCAACA AACACTGCGT AACATTGCAG AATGCGGTAT TGACACCGTG
TGCTACAACT TCATGCCGAT ACTGGACTGG ACGCGTACTG ATCTGGAATA TGAATTACCA
GACGGTTCTA AAGCGTTGCG TTTTGACCAG ATAGCTTTTG CCGCTTTTGA GCTGCATATT
CTAAAACGCC CTGGTGCCAG CAATGACTAT ACGGCGGAAG AACAAGTACA GGCAGAAGCG
TATTTCAACG CGATGACTGA AGCTGATATT GCCAAGCTGA CGGGCAATAT TATTGCAGGT
CTGCCAGGGG CTGAAGAGGG CTATACGCTG GATCAGTTCC GTGCTCGGTT GGCTGAGTAC
GATGGGATTG ATAAAGCGCA ACTGCGTGAG AACATGGCTT ACTTCCTGCG CGCTATCATT
CCGGTGGCGG AACAAGTGGG CTTGCGTATG GCGGTGCACC CAGATGATCC ACCGCGCCCA
ATCCTTGGCC TGCCGCGTAT CGTTTCAACC ATTGAAGATA TGCAGTGGCT GAAAGAGACG
GTGGATAGCA TTCACAACGG TTTCACCATG TGTACCGGTT CGTATGGTGT GCGTGCTGAT
AACGATTTGG TGAAGATGAT CGAAACCTTT GGTGATCGTA TTCACTTCAC GCATTTGCGT
TCGACCTGTC GTGAAGGAAA TCCAAAAACC TTCCATGAAG GGGGGCATTT GCAAGGCGAT
GTGGATATGT ACTCGGTGGT AAAAGCCATT TTAACCGAAG AACAACGCCG CCAGTCACTG
GGGGATATGC GTCCAATACC TATGCGTCCG GACCATGGTC ATCAGATGCT GGACGATTTG
CACAAGAAAA CCAATCCGGG CTACTCGGCA ATTGGGCGTC TGAAAGGGCT GGCAGAAGTT
CGTGGTGTGG AATTGGCACT GAAACGGACA TTTTTCCCCG ATCTGAAGCA GTAG
|
|---|
| Protein sequence | MEQTWRWYGP NDPVSLDDIR QAGATGVVTA LHHIPNGVVW PVSEIKQRQA ELAAKNLVWS
VVESVPIHED IKTHSGNYQQ YIENYQQTLR NIAECGIDTV CYNFMPILDW TRTDLEYELP
DGSKALRFDQ IAFAAFELHI LKRPGASNDY TAEEQVQAEA YFNAMTEADI AKLTGNIIAG
LPGAEEGYTL DQFRARLAEY DGIDKAQLRE NMAYFLRAII PVAEQVGLRM AVHPDDPPRP
ILGLPRIVST IEDMQWLKET VDSIHNGFTM CTGSYGVRAD NDLVKMIETF GDRIHFTHLR
STCREGNPKT FHEGGHLQGD VDMYSVVKAI LTEEQRRQSL GDMRPIPMRP DHGHQMLDDL
HKKTNPGYSA IGRLKGLAEV RGVELALKRT FFPDLKQ
|
|---|
| |