Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2666 |
Symbol | |
ID | 5386588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3018575 |
End bp | 3020572 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865656 |
Product | putative outer membrane receptor |
Protein accession | YP_001401631 |
Protein GI | 153947924 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTAAGG TTAACCAACG TTTTAGAAAA ACACATTCAG CGGCATTAGT TATAGCGGCG GTTATTTCAT CGCAAGGGTA TGCGGCTGAA AAAACAAATA CAGCCACACC AACCGATACA ATGGTGGTCA CTGCGTCAGG TTTCCAGCAG CGTATTCAGG ATTCTGCGGC CTCAATTTCC GTGGTCACCC GCGAGCAGAT TGAAAATAAA GCTTATCGTG ATGTCACGGA TGCGTTGAAA GATGTTCCCG GTGTTGTGAT TACCGGAGGG GGCAGTACAA GCGATATCAG CATCCGTGGT ATGGCGGCGA AATACACCCT GATTCTGGTC AATGGCAAAC GTGTTGATAC CCGCAGTACC AGGCCAAACA GCGATGGCTC TGGGATTGAA CAAGGTTGGT TGCCCCCTCT GGCGGCCATT GATCGTATTG AGGTGGTCCG TGGGCCAATG TCCTCTTTAT ATGGTTCGGA CGCCATGGGC GGTGTGATTA ACATCATTAC CCGCAAAGTG GGTAAAGAGT GGCATGGCAC GGTACGTGCG GATGCGACCT TACAGGAGGA CAGCAAGTCC GGGGATATAT TCCAGACCAA TGCTTACGCC TCAGGTCCTT TAATTGACGG TTTATTGGGC CTTAAAGTCA GCGGTCTACT TTCTCATCGT AGTGAAGATA AAATTATCGA TGGTTATAAT CAACAGCGCA TGAGAAATGG TACGGCAACA TTTACTCTGA CGCCTGACGA TAATAATGAA TTTGATTTTG ACATTGGCCA TTATGTACAA GATAGAAATT CAACCCCAGG ACGAACACTG GCATTAAACG GAACGAATAG TGACACCCAA TATGACCGTA ATAATTATGC GGTTACTCAT AATGGTTATT ATGATTTTGG TAATTCAACC AGTTATATTC AGCGTGATGA AACCCGTAAT CCATCCCGTC AAATGAAAAG TGTGGATAAT ATCTTCAATA CCCAAACATC CTTCTTATTA GATAACCACA CTTTAATTCT GGGGGGGCAA TACCGTTATG AAGAACTGTA TGATAAAGGT AACCAATTAC CTTCTGCCAG TGATCTGAAG AAATTAACCC GTTGGAGCTG GGCATTATTT GCTGAAGATG AATGGCAGAT GACCAACGAT TTCGCGCTAA CTGGCGGCAT TCGTATGGAT CAAGATCAAA ACTACGGTAC CCATTGGACG CCACGTTTAT ACGGAGTCTG GCATTTAGCG GACCAATGGA CATTAAAAGG CGGGGTATCC GGCGGTTACC GTTCACCTGA TTTACGTCAG GCAACCGATG ACTGGGGCCA GCTCTCTGGT GGGGGAAAAG GCGGGCTTCC CGCACTTATT CTGGGTAATT CTAACTTGAA ACCCGAGCGC AGCATTAGCC AGGAAATTGG CATACTGTGG GACGATCAGG AAGGGATGAA CGCCAGCGTG ACGCTGTTCT ATACCGACTT CAAAGATAAA ATTACTGAAG TACGCAACTG TGATATCACC ACAAATACGA CTGGGCAGTG TGTATTTAAT GGTATCAATT ATAAATTCAT CAGTGATCGT ATTAACGTTG ATAAAGCCAT GACTCGTGGG GCAGAAGCGA CCTTTGCTTG GGATATCAAT CAAGCCTGGT CGTTAGCCAC TAACTATACC TTTACCCAAT CTGAGCAGAA GAGCGGGGCA TTTGCCGGCC AGCCATTAAA CCAGATGCCT AAGCATATGC TGAATGGGAC GTTAAACTGG AAAACTACCG AAGATTTTGC AACCTGGATC CGAGCCAATT ACCGTGGCAA GGCTTCTGAA TATCTTAATC GTACCAGTAT GGGCAGCCGT ACTCCGTCAT ATACTTTTGT CGATTTAGGG GCAAATTATC AGCTGACAAA AGAAGTGCGT CTGATGGGCG GTGTTTACAA CCTGTTGGAT AAGCGTGTGG ATATTGACGT TAACGATAAG GTGTTGGATG GTCGTCGGTA TATGGTGGGT GCCAGCTACG ATTTTTAA
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Protein sequence | MAKVNQRFRK THSAALVIAA VISSQGYAAE KTNTATPTDT MVVTASGFQQ RIQDSAASIS VVTREQIENK AYRDVTDALK DVPGVVITGG GSTSDISIRG MAAKYTLILV NGKRVDTRST RPNSDGSGIE QGWLPPLAAI DRIEVVRGPM SSLYGSDAMG GVINIITRKV GKEWHGTVRA DATLQEDSKS GDIFQTNAYA SGPLIDGLLG LKVSGLLSHR SEDKIIDGYN QQRMRNGTAT FTLTPDDNNE FDFDIGHYVQ DRNSTPGRTL ALNGTNSDTQ YDRNNYAVTH NGYYDFGNST SYIQRDETRN PSRQMKSVDN IFNTQTSFLL DNHTLILGGQ YRYEELYDKG NQLPSASDLK KLTRWSWALF AEDEWQMTND FALTGGIRMD QDQNYGTHWT PRLYGVWHLA DQWTLKGGVS GGYRSPDLRQ ATDDWGQLSG GGKGGLPALI LGNSNLKPER SISQEIGILW DDQEGMNASV TLFYTDFKDK ITEVRNCDIT TNTTGQCVFN GINYKFISDR INVDKAMTRG AEATFAWDIN QAWSLATNYT FTQSEQKSGA FAGQPLNQMP KHMLNGTLNW KTTEDFATWI RANYRGKASE YLNRTSMGSR TPSYTFVDLG ANYQLTKEVR LMGGVYNLLD KRVDIDVNDK VLDGRRYMVG ASYDF
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