| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2662 |
|---|
| Symbol | |
|---|
| ID | 5385003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3014211 |
|---|
| End bp | 3015035 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640865652 |
|---|
| Product | NLPA family lipoprotein |
|---|
| Protein accession | YP_001401627 |
|---|
| Protein GI | 153947583 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA CACCTGTTTC TAGCCTGGTT CGTACAGCAT TATTCGCAGC ATTAGCTTCT
GCTTTCAGCT TATCAGCCCA GGCGGCTGAG GCACTGCGGG TAGCGGCTGA CCCCGTGCCC
CATGCTGAAA TCCTGCAATT CGTACAAAAG CTGGACCCTT CACTGAATTT GACCATTATC
GAAATCCCCA ACGGGGTGAA CTCCAACGAA TTGCTGGCCC ATGGCGATGT TGATGCTAAT
TATTTTCAGC ATCTCCCATA TTTACACTCA CAAGAGCAGG CACTAGGGCA AAAATTTGTG
GTTGCAGCCA CCGTCCATAT TGAGCCACTT GGCATTTATT CACACAAATA TAAAAACGTT
GCCGAAGTGC CGGATAAGGG CAGCGTCGCG GTACCGAATA ACGTCACTAA CCTCAGCCGT
GCACTCTATT TACTGCAAGA GCAGGGACTG ATCACCTTAA AACCGGGTTT TACTGACCCA
GCCAAACAGC AGGCAACACC GAAAGATATC GCGGAGAATC CCAAGCACCT GAAAATCTTG
GAAATCGAAT CACCACAAAT CCCTCGCTCA TTGGATGATG TTGATTTAGC CGTCATTAAT
GGCAACTATG CTCTGGAGGC AGGGTTAAAT CCGGCAACCG ATGCATTGGG GTTGGAGAAA
GCTGAAGGTA ATCCTTACGC CAATATTTTG GTGACCACCC CTACGTTGGA AAATGATCCG
CGAATCAAGC AACTGGCAAA AGATTTGCAA TCGCAGGAAG TGGCTAAATT TATTACTGAA
AAATATGCTG GCTCGGTTAT CCCGGTGGCA GGAACTCAAC CATGA
|
|---|
| Protein sequence | MTKTPVSSLV RTALFAALAS AFSLSAQAAE ALRVAADPVP HAEILQFVQK LDPSLNLTII
EIPNGVNSNE LLAHGDVDAN YFQHLPYLHS QEQALGQKFV VAATVHIEPL GIYSHKYKNV
AEVPDKGSVA VPNNVTNLSR ALYLLQEQGL ITLKPGFTDP AKQQATPKDI AENPKHLKIL
EIESPQIPRS LDDVDLAVIN GNYALEAGLN PATDALGLEK AEGNPYANIL VTTPTLENDP
RIKQLAKDLQ SQEVAKFITE KYAGSVIPVA GTQP
|
|---|
| |