Gene YpsIP31758_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2634 
Symbol 
ID5388378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2989029 
End bp2990087 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content52% 
IMG OID640865623 
Productiron chelate ABC transporter permease protein 
Protein accessionYP_001401599 
Protein GI153947939 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000000000212766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCT TTTTAGAACC CCTCACGCAG GGACGGCAAT TTTTTCAGCA ACTTCATCTA 
CGACGCGGGT TATTCACACT GGCATTGATT GGCTCGCTAC TGGCCGCTAT GGTCATCGAT 
CTGGTCACTG GCGCGGCCAA CCTTAGCCCA CTTGATGTAT TGCGGCTGTT TCTGGTGGAT 
TCTTCGCAGC ATGATGAACT ACACCAGATC ATTTTTTGGT CCATTCGTTT GCCGATGACG 
TTAACCGCCG TGGTGGTGGG CGCGAGTTTG GGTTTGGCTG GCTTGTTGAT GCAAACCGTC 
TTGGCGAATC CGTTAGCCAG TCCTTATACC TTGGGGATTT CAGCCGCGGC AGGATTTGGT 
GCCGCATTAT CGATCATCAC TGGCTTCAGC GTGGGGGGAG TCTTGGCATT AGGCACTCCA 
TTATTGGCTT CACTGATGGC ATTACTGGCC TGCCTGCCCA TTTACTTTCT GGGCCAACGG 
CAGGGGATGA CACCGCAAAT TCTGGTGTTG AGCGGCATTG TGGTGCTGTT CTTCTTCCAG 
TCGTTGCAAT CACTCATGTT ATTTCTGGCC TCACCAGAAG CGATGCAACA AATTGTATTC 
TGGCTGTTTG GCAGCCTGCT GAAAGCCAAT ATGCAGGGGG TGCTAATGAC GGGCAGCGTA 
CTGGCTTGTT CACTGGTTAT CTGTTTGCAG CAGGCATGGC GATTGACCGC GCTTTCAGCG 
GGGGAGGAGC AAGCGTTAGG TTTGGGAATT AACGTAAGCG CCTTACGTAA GTTAGCGTTT 
CTTCTGGCGA CCTTGTTGAC CGCCGCTTCT GTGTCTTTTG TCGGCACTAT CGGCTTTATC 
GGTTTGGTCG CCCCTCACTT CGCCCGTATG TTGGTCGGCG AAGATCAACG CTATCTGATC 
GGTATTTCGG CACTTTGTGG CAGCCTGCTA TTGGTTCTGG CCTCTATCAT TTCCAAACTC 
ATACTGCCAA ATGGTGTCGT GCCGATCGGC ATTATTATTG CGCTGATCGG TGTCCCGGTA 
TTGTTCTATT TTGTGACTAA ACAGGTGAAA CGGGCATGA
 
Protein sequence
MATFLEPLTQ GRQFFQQLHL RRGLFTLALI GSLLAAMVID LVTGAANLSP LDVLRLFLVD 
SSQHDELHQI IFWSIRLPMT LTAVVVGASL GLAGLLMQTV LANPLASPYT LGISAAAGFG 
AALSIITGFS VGGVLALGTP LLASLMALLA CLPIYFLGQR QGMTPQILVL SGIVVLFFFQ 
SLQSLMLFLA SPEAMQQIVF WLFGSLLKAN MQGVLMTGSV LACSLVICLQ QAWRLTALSA 
GEEQALGLGI NVSALRKLAF LLATLLTAAS VSFVGTIGFI GLVAPHFARM LVGEDQRYLI 
GISALCGSLL LVLASIISKL ILPNGVVPIG IIIALIGVPV LFYFVTKQVK RA