| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2609 |
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| Symbol | cspD |
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| ID | 5388342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2963769 |
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| End bp | 2964032 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640865598 |
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| Product | cold shock domain-containing protein CspD |
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| Protein accession | YP_001401574 |
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| Protein GI | 153950801 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGACGG GTACTGTTAA ATGGTTCAAC AACGCCAAAG GTTTTGGCTT TATTTGCCCT
GAGGGCGGTG GCGAAGACAT TTTCGCTCAC TATTCAACTA TCCAGATGGA TGGTTACCGA
ACATTAAAAG CCGGACAAAT AGTTAACTTT GATGTTCATG AAGGCCCTAA AGGGAACCAT
GCTAGCCTGA TTGTTCCGCT AGAGTTAAAT AGTGTACCAC CGTTAGACGG TGTATCACCG
CCGGAACTCG CTATACTGGC CTGA
|
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| Protein sequence | METGTVKWFN NAKGFGFICP EGGGEDIFAH YSTIQMDGYR TLKAGQIVNF DVHEGPKGNH
ASLIVPLELN SVPPLDGVSP PELAILA
|
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