Gene YpsIP31758_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2593 
SymbolserS 
ID5385816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2945143 
End bp2946435 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content49% 
IMG OID640865582 
Productseryl-tRNA synthetase 
Protein accessionYP_001401558 
Protein GI153948058 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATC CCAATATGCT GCGCAATGAG CTAGACGCAG TCGCCGAAAA ACTGGCTCGC 
AGAGGTTTTA AACTTGATGT TGAGGTGTTG CGCCAACAAG AAGAGCGCCG CAAAGTTTTA
CAGGTTGAAA CAGAAAGTCT GCAGGCAGAA CGTAACTCCC GATCGAAACA GATCGGTGCA
GCAAAGGCGC GTGGCGAAGA TATCGAACCA TTACGTCTGG AAGTGAATGC TCTGGGTGAA
AAACTGGATG CCGCTAAAGC TGAGTTGGAT AAGTTACAAA ACGAAATCCG CGATTTAGCG
CTGTCTATCC CTAATCTGCC AGATGATTCA GTACCGGTAG GTAAAAACGA GAATGACAAT
ATTGAAGTCA GTCGGTGGGG CGAGCCTCGC AAATATGACT TCGACGTAAA AGATCATGTT
TCTCTGGGCG AAATGGCCGG TGGCCTTGAT TTTGCTGCCG CTGTGAAACT GACCGGCGCA
CGCTTTGTGG TGATGAAAGG GCAAATTGCC CGTATGCACC GTGCTCTGTC TCAGTTCATG
TTAGACCTGC ACACCGAGAA ACACGGTTAT CTGGAAGCTT ACGTCCCTTA TCTGGTTAAT
CATGCCACCT TGTACGGTAC GGGTCAGTTA CCCAAGTTTG GTGAAGATCT ATTCCATACT
AAACCGTTGG CAGAAGAATC AGATAACAGT AACTATGCTT TGATTCCTAC TGCTGAAGTT
CCGCTGACCA ACTTGGTGCG CGATGAAATT TTGGAAGAGG ATTCTCTGCC ATTGAAGTTG
ACCGCCCATA CACCATGCTT CCGTTCTGAA GCAGGTTCCT ATGGCCGTGA TACCCGTGGT
TTGATCCGGA TGCATCAATT CGACAAAGTT GAAATGGTGC AGATCACTCG TCCGGAAGAT
TCTATGGCCG CGCTGGAAGA GTTGACAGGG CACGCCGAGA AAGTTCTGCA ATTACTGGAG
TTGCCATACC GCAAGGTATT GCTGTGTACG GGTGATATGG GCTTTGGCTC CAGCAAAACT
TACGATCTGG AAGTATGGTT GCCAGCACAG GACACTTACC GCGAAATATC CTCATGTTCT
AACATGTGGG ATTTCCAGGC GCGCCGTATG CAGGCCCGTT ATCGCAACAA GACCGACAGA
AAGACGCGTT TAGTGCACAC GCTGAACGGC TCTGGTTTGG CGGTTGGGCG TACCTTGGTA
GCGGTGTTGG AAAACTATCA ACAGGCAGAT GGTCGTATCC AGGTCCCTGA CGTATTACGT
CCATATATGG GTGGCTTGGA ATATATTGGT TAA
 
Protein sequence
MLDPNMLRNE LDAVAEKLAR RGFKLDVEVL RQQEERRKVL QVETESLQAE RNSRSKQIGA 
AKARGEDIEP LRLEVNALGE KLDAAKAELD KLQNEIRDLA LSIPNLPDDS VPVGKNENDN
IEVSRWGEPR KYDFDVKDHV SLGEMAGGLD FAAAVKLTGA RFVVMKGQIA RMHRALSQFM
LDLHTEKHGY LEAYVPYLVN HATLYGTGQL PKFGEDLFHT KPLAEESDNS NYALIPTAEV
PLTNLVRDEI LEEDSLPLKL TAHTPCFRSE AGSYGRDTRG LIRMHQFDKV EMVQITRPED
SMAALEELTG HAEKVLQLLE LPYRKVLLCT GDMGFGSSKT YDLEVWLPAQ DTYREISSCS
NMWDFQARRM QARYRNKTDR KTRLVHTLNG SGLAVGRTLV AVLENYQQAD GRIQVPDVLR
PYMGGLEYIG