Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2593 |
Symbol | serS |
ID | 5385816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2945143 |
End bp | 2946435 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865582 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001401558 |
Protein GI | 153948058 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATC CCAATATGCT GCGCAATGAG CTAGACGCAG TCGCCGAAAA ACTGGCTCGC AGAGGTTTTA AACTTGATGT TGAGGTGTTG CGCCAACAAG AAGAGCGCCG CAAAGTTTTA CAGGTTGAAA CAGAAAGTCT GCAGGCAGAA CGTAACTCCC GATCGAAACA GATCGGTGCA GCAAAGGCGC GTGGCGAAGA TATCGAACCA TTACGTCTGG AAGTGAATGC TCTGGGTGAA AAACTGGATG CCGCTAAAGC TGAGTTGGAT AAGTTACAAA ACGAAATCCG CGATTTAGCG CTGTCTATCC CTAATCTGCC AGATGATTCA GTACCGGTAG GTAAAAACGA GAATGACAAT ATTGAAGTCA GTCGGTGGGG CGAGCCTCGC AAATATGACT TCGACGTAAA AGATCATGTT TCTCTGGGCG AAATGGCCGG TGGCCTTGAT TTTGCTGCCG CTGTGAAACT GACCGGCGCA CGCTTTGTGG TGATGAAAGG GCAAATTGCC CGTATGCACC GTGCTCTGTC TCAGTTCATG TTAGACCTGC ACACCGAGAA ACACGGTTAT CTGGAAGCTT ACGTCCCTTA TCTGGTTAAT CATGCCACCT TGTACGGTAC GGGTCAGTTA CCCAAGTTTG GTGAAGATCT ATTCCATACT AAACCGTTGG CAGAAGAATC AGATAACAGT AACTATGCTT TGATTCCTAC TGCTGAAGTT CCGCTGACCA ACTTGGTGCG CGATGAAATT TTGGAAGAGG ATTCTCTGCC ATTGAAGTTG ACCGCCCATA CACCATGCTT CCGTTCTGAA GCAGGTTCCT ATGGCCGTGA TACCCGTGGT TTGATCCGGA TGCATCAATT CGACAAAGTT GAAATGGTGC AGATCACTCG TCCGGAAGAT TCTATGGCCG CGCTGGAAGA GTTGACAGGG CACGCCGAGA AAGTTCTGCA ATTACTGGAG TTGCCATACC GCAAGGTATT GCTGTGTACG GGTGATATGG GCTTTGGCTC CAGCAAAACT TACGATCTGG AAGTATGGTT GCCAGCACAG GACACTTACC GCGAAATATC CTCATGTTCT AACATGTGGG ATTTCCAGGC GCGCCGTATG CAGGCCCGTT ATCGCAACAA GACCGACAGA AAGACGCGTT TAGTGCACAC GCTGAACGGC TCTGGTTTGG CGGTTGGGCG TACCTTGGTA GCGGTGTTGG AAAACTATCA ACAGGCAGAT GGTCGTATCC AGGTCCCTGA CGTATTACGT CCATATATGG GTGGCTTGGA ATATATTGGT TAA
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Protein sequence | MLDPNMLRNE LDAVAEKLAR RGFKLDVEVL RQQEERRKVL QVETESLQAE RNSRSKQIGA AKARGEDIEP LRLEVNALGE KLDAAKAELD KLQNEIRDLA LSIPNLPDDS VPVGKNENDN IEVSRWGEPR KYDFDVKDHV SLGEMAGGLD FAAAVKLTGA RFVVMKGQIA RMHRALSQFM LDLHTEKHGY LEAYVPYLVN HATLYGTGQL PKFGEDLFHT KPLAEESDNS NYALIPTAEV PLTNLVRDEI LEEDSLPLKL TAHTPCFRSE AGSYGRDTRG LIRMHQFDKV EMVQITRPED SMAALEELTG HAEKVLQLLE LPYRKVLLCT GDMGFGSSKT YDLEVWLPAQ DTYREISSCS NMWDFQARRM QARYRNKTDR KTRLVHTLNG SGLAVGRTLV AVLENYQQAD GRIQVPDVLR PYMGGLEYIG
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