Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2590 |
Symbol | |
ID | 5385503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2941215 |
End bp | 2941889 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640865579 |
Product | LPS glycosyltransferase family protein |
Protein accession | YP_001401555 |
Protein GI | 153947445 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA ATTGGAATTG GTCTTTAGTA GACAAAGTTG TTTACATTAA TTTGAAGGAA CGTACGGATA GAAATGAGCA CATCAAAAAA GAACTGGAAA AAGTGTGCTT TCCACCTGAA AAAATAATCC GCTTTGAGGC AATAAGAGCA GGGTCAGGTT TTATCGGTTG CGCAAAATCA CATCTTGCAG TATTAAAAAT GGCGCAAGAG AATAATTGGA GAAATATTTT GATACTTGAA GACGATATGG TCTTCGAAGA TGATGATGAA ACAATTATCC GGACAAACAA TTTTCTCTCT AAACTGAATA ATATTCATTG GGATGCTGCA TTTTTATCCG CCAGCTATTA TATCGTTAAC GCTATTGATG ATAATTTTTT TAAAGTCAAT TTCGCCTATC TGGCTAACAG CTATCTGGTC AATAATCATT ATTATGAAAA ATTAATCAAT AACTACACGG AGTCTGTTCA GCGATTAACA AATGGCGAGT CATCGTCAGA GTACGGGTTG GATTCTAACT GGTTGAAAAT AATGAAAATA GACAACTGGT ACGGAATTTA CCCGGTTATT GGCTATCAGC GTACCGATAT CAGTGATATT GAATATAAAG AGATCGATCG CACACACCAG TTCACCCGAA CATTCGATAA GATGAAAGCA TACGGTTCAA AATAA
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Protein sequence | MNENWNWSLV DKVVYINLKE RTDRNEHIKK ELEKVCFPPE KIIRFEAIRA GSGFIGCAKS HLAVLKMAQE NNWRNILILE DDMVFEDDDE TIIRTNNFLS KLNNIHWDAA FLSASYYIVN AIDDNFFKVN FAYLANSYLV NNHYYEKLIN NYTESVQRLT NGESSSEYGL DSNWLKIMKI DNWYGIYPVI GYQRTDISDI EYKEIDRTHQ FTRTFDKMKA YGSK
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