Gene YpsIP31758_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2582 
SymbolaroA 
ID5385021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2928056 
End bp2929342 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content52% 
IMG OID640865571 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_001401547 
Protein GI153949635 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000437887 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAT CCCTGACCTT ACAACCCATT GCCCTAGTTA ATGGCACCGT TAATTTACCT 
GGTTCGAAGA GTGTCTCTAA CCGCGCACTG CTTCTGGCCG CGTTGGCCGA AGGGACCACT
CAGTTGAATA ACGTGTTAGA CAGCGATGAC ATCCGCCACA TGCTCAATGC ATTACAGGCA
TTAGGGGTGA ACTTCCGCCT TTCTGCTGAT CGCACATGCT GTGAGGTTGA TGGTCTGGGG
GGGAAATTAG TGGCTGAACA GCCATTGTCG CTTTTCTTGG GCAATGCCGG CACCGCCATG
CGTCCTTTGG CCGCGGTGTT ATGTTTGGGT AATAGCGATA TCGTACTGAC GGGTGAGCCT
CGGATGAAGG AGCGGCCAAT TGGCCATTTG GTGGATGCGC TACGTCAGGG CGGTGCACAG
ATCGATTATC TGGAACAAGA AAATTACCCG CCATTACGTT TACGTGGTGG TTTCCGAGGG
GGGGAGTTAA CTGTTGATGG GCGTGTCTCT AGCCAGTTCC TGACTGCTTT ATTGATGACC
GCCCCGCTGG CGGAGCAAGA TACGACTATT CGGATTATGG GTGATCTGGT TTCCAAACCT
TATATCGATA TTACTCTGCA CTTGATGAAA GCATTTGGTA TTGACGTGGG GCATGAGAAC
TACCAAATTT TCCACATCAA AGGGGGCCAG ACCTACCGCT CACCAGGGAC TTATTTGGTT
GAGGGCGATG CCTCGTCGGC TTCCTACTTC TTAGCGGCTG CGGCTATTAA GGGGGGAACA
GTGCGTGTCA CTGGTATTGG CAAGAAAAGT GTACAGGGCG ACACTAAATT TGCCGATGTG
TTGGAAAAAA TGGGCGCGAA AGTGACGTGG GGGGATGATT ATATCGAGTG CAGTCGTGGT
GAATTACAGG GCATTGACAT GGATATGAAC CACATTCCTG ATGCTGCAAT GACCATTGCG
ACTACGGCAT TATTTGCCAC GGGCCCAACG ACGATCCGCA ATATCTACAA CTGGCGGGTA
AAAGAAACTG ACCGGCTGAC GGCGATGGCA ACCGAGTTGA GAAAAGTAGG TGCTGAAGTG
GAAGAGGGGG AAGATTACAT CCGCGTGGTT CCACCCGTGC AGCTAACTGC TGCAGATATT
GGTACCTACG ATGACCACCG TATGGCGATG TGTTTCTCGC TGGTCGCGTT ATCAGACACC
CCCGTGACGA TCCTTGACCC GAAATGTACC GCAAAAACCT TCCCTGATTA TTTTGAACAG
TTTGCGCGTC TGAGCCAACT GGCCTGA
 
Protein sequence
MLESLTLQPI ALVNGTVNLP GSKSVSNRAL LLAALAEGTT QLNNVLDSDD IRHMLNALQA 
LGVNFRLSAD RTCCEVDGLG GKLVAEQPLS LFLGNAGTAM RPLAAVLCLG NSDIVLTGEP
RMKERPIGHL VDALRQGGAQ IDYLEQENYP PLRLRGGFRG GELTVDGRVS SQFLTALLMT
APLAEQDTTI RIMGDLVSKP YIDITLHLMK AFGIDVGHEN YQIFHIKGGQ TYRSPGTYLV
EGDASSASYF LAAAAIKGGT VRVTGIGKKS VQGDTKFADV LEKMGAKVTW GDDYIECSRG
ELQGIDMDMN HIPDAAMTIA TTALFATGPT TIRNIYNWRV KETDRLTAMA TELRKVGAEV
EEGEDYIRVV PPVQLTAADI GTYDDHRMAM CFSLVALSDT PVTILDPKCT AKTFPDYFEQ
FARLSQLA