Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2581 |
Symbol | cmk |
ID | 5388411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2927051 |
End bp | 2927743 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865570 |
Product | cytidylate kinase |
Protein accession | YP_001401546 |
Protein GI | 153950909 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000000568011 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCGA TAGCCCCGGT GATAACCGTT GATGGACCGA GTGGTGCGGG TAAAGGTACG CTTTGCAAAG CATTGGCTGA ATCATTGAAC TGGCGCTTGC TGGATTCTGG TGCGATTTAC CGAGTGCTGG CACTCGCTGC TTTGCATCAT CAGGTCGATA TCAGCACCGA AGAGGCATTG GTACCACTTG CCGCACATCT CGATGTTCGT TTTGTTTCAC AGAATGGGCA GCTACAAGTT ATTTTAGAAG GCGAGGATGT CAGCAATGAG ATCCGAACCG AGACAGTGGG TAATACTGCA TCCCAAGCGG CGGCTTTCCC CCGTGTACGT GAAGCATTAC TGCGTCGCCA GCGAGCTTTT CGCGAAGCGC CTGGTTTAAT TGCTGATGGC CGGGATATGG GGACTATCGT GTTTCCTGAT GCACCTGTGA AAATATTTCT TGATGCCAGT TCGCAAGAAC GCGCACACAG ACGTATGCTA CAGTTGCAGG AAAGAGGGTT TAATGTTAAC TTTGAACGTC TTTTGGCCGA GATACAGGAG CGGGATAACC GTGATCGTAA CCGGTCTGTT GCACCTTTAG TCCCTGCGGC GGATGCGTTG GTACTGGATT CAACCAGTAT GTCCATCGAA CAGGTGATCG AACAGGCGCT GGCTTATGCC CAACGAATTT TAGCCTTGCC GTTGAAAAAA TAA
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Protein sequence | MTAIAPVITV DGPSGAGKGT LCKALAESLN WRLLDSGAIY RVLALAALHH QVDISTEEAL VPLAAHLDVR FVSQNGQLQV ILEGEDVSNE IRTETVGNTA SQAAAFPRVR EALLRRQRAF REAPGLIADG RDMGTIVFPD APVKIFLDAS SQERAHRRML QLQERGFNVN FERLLAEIQE RDNRDRNRSV APLVPAADAL VLDSTSMSIE QVIEQALAYA QRILALPLKK
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