Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2560 |
Symbol | |
ID | 5386141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2900875 |
End bp | 2902065 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865549 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_001401525 |
Protein GI | 153949374 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000517501 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA AAATTACTGC TGCACCTGCG GATCCTATTT TAGGTTTGAC CGATATCTTC CGCGCGGATG ACCGCGCTCA TAAAATCAAT CTGGGGATCG GTGTCTACAA AGACGAAACC GGTAAAACCC CAGTGCTGAC CAGCGTGAAG AAAGCTGAGC AGTATTTACT GGAAAATGAA GCTACCAAAA ATTATCTGGG TATTGACGGC CTGCCTGTTT TTGCCAGTTG CACCCAAGAA CTGCTGTTCG GTGCTAATAG TGCAATTATT GCGGATAAAC GTGCTCGTAC CGCTCAAACG CCAGGTGGTA CCGGTGGTTT GCGCATTGCC GCTGATTTTA TCGCCCATCA GACCAGCGCT AAACGTGTCT GGGTCAGTAA CCCAAGCTGG CCAAACCATA AAAACGTCTT CGAAGCCGCA GGGCTGGAAG TGGTGGAGTA CGCTTATTAT GATGCTGCTA ACCATGCATT GGACTTCGAT GGCTTGTTAA ATAGCCTGTC AGAAGCTCAG GCGGGTGATG TGGTGTTGTT CCACGGCTGC TGCCATAACC CAACGGGTAT CGACCCAACA GAAACTCAGT GGAGCCAACT GGCGGAGTTA TCGGTTGCTA AAGGCTGGTT GCCACTGTTT GATTTCGCTT ATCAAGGCTT TGCCAACGGT TTGGAAGAAG ATGCTCAGGG CCTGCGTATT TTCGCGGCAA CACATCAAGA GTTGATCGTT TGCAGCTCTT ATTCGAAAAA CTTTGGTTTG TACAATGAAC GTGTTGGGGC TTGTACCCTT GTCGCCGCCG ACAGTAACGT TGCCGATACC GCATTCAGCC AAGTTAAAGC GGTTATCCGA GCCAACTACT CTAACCCACC GGCACATGGT GCATCAGTCG TTGCCACTAT TCTGAGTAAT GCCGCACTAC GGGCGATTTG GGAACAAGAA CTGACCGATA TGCGTCAGCG CATCCAACGT ATGCGTCAGT TGTTTGTTAA TACCTTGCAG GAAAAAGGCG CTCAACAAGA TTTTAGCTTT ATCATTAACC AGAATGGGAT GTTCTCGTTC AGTGGTCTGA CCAAAGAACA AGTGCTGCGC CTGCGTGATG AGTTCGCCGT CTATGCGGTA AATTCTGGCC GGGTTAACGT GGCGGGGATG ACACCAGACA ATATGGCGCC GTTATGTGAA GCTATCGTTG CGGTGCTCTA A
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Protein sequence | MFEKITAAPA DPILGLTDIF RADDRAHKIN LGIGVYKDET GKTPVLTSVK KAEQYLLENE ATKNYLGIDG LPVFASCTQE LLFGANSAII ADKRARTAQT PGGTGGLRIA ADFIAHQTSA KRVWVSNPSW PNHKNVFEAA GLEVVEYAYY DAANHALDFD GLLNSLSEAQ AGDVVLFHGC CHNPTGIDPT ETQWSQLAEL SVAKGWLPLF DFAYQGFANG LEEDAQGLRI FAATHQELIV CSSYSKNFGL YNERVGACTL VAADSNVADT AFSQVKAVIR ANYSNPPAHG ASVVATILSN AALRAIWEQE LTDMRQRIQR MRQLFVNTLQ EKGAQQDFSF IINQNGMFSF SGLTKEQVLR LRDEFAVYAV NSGRVNVAGM TPDNMAPLCE AIVAVL
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