Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2542 |
Symbol | ompA |
ID | 5384429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2874125 |
End bp | 2875198 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640865531 |
Product | outer membrane protein A |
Protein accession | YP_001401507 |
Protein GI | 153947861 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 9.37616e-18 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCGTA AAATGAAAAA GACAGCTATC GCATTAGCAG TGGCACTGGT AGGTTTCGCT ACAGTAGCGC AAGCCGCACC AAAAGATAAC ACCTGGTACA CCGGTGGTAA ATTGGGTTGG TCTCAGTATC AAGATACTGG TTCTATCATC AATAACGATG GTCCAACTCA TAAAGATCAG CTGGGTGCCG GTGCGTTCTT CGGTTACCAA GCAAATCAGT ACCTGGGCTT TGAGATGGGA TACGACTGGC TTGGTCGTAT GCCTTACAAA GGCGACATCA ATAATGGCGC TTTCAAGGCT CAAGGCGTTC AGTTAGCAGC TAAACTGAGC TACCCAGTAG CACAAGACCT TGACGTATAT ACCCGTCTGG GTGGTTTAGT ATGGCGTGCA GATGCTAAAG GCTCCTTCGA TGGTGGTCTT GACCGTGCTA GCGGCCATGA TACCGGTGTT TCTCCATTGG TAGCTCTGGG TGCTGAATAC GCATGGACCA AAAACTGGGC AACCCGTATG GAATACCAGT GGGTTAACAA CATCGGCGAC CGTGAAACCG TTGGTGCTCG TCCAGACAAC GGCCTCCTGA GTGTTGGTGT TTCTTACCGC TTTGGTCAGG AAGATGCAGC AGCGCCAATC GTTGCTCCAA CACCTGCTCC AGCGCCAATT GTTGACACTA AGCGTTTCAC ATTAAAATCT GATGTGCTGT TTGGTTTCAA CAAAGCAAAC CTGAAGCCAG AAGGCCAGCA AGCTCTGGAC CAACTGTACG CACAACTGAG CTCTATCGAT CCTAAAGATG GTTCTGTAGT TGTTCTGGGC TTTGCTGACC GTATCGGTCA ACCAGCGCCT AACTTAGCTC TGTCTCAGCG TCGTGCTGAC AGCGTGCGTG ACTACCTGGT TTCTAAAGGT ATCCCTGCTG ACAAAATCAC TGCTCGCGGT GAAGGTCAAG CAAACCCAGT TACAGGCAAC ACCTGTGACA ACGTGAAACC ACGTGCTGCT CTGATTGAGT GCCTGGCACC AGATCGTCGC GTAGAGATCG AAGTGAAAGG CTACAAAGAA GTTGTGACTC AGCCACAGGC TTAA
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Protein sequence | MRRKMKKTAI ALAVALVGFA TVAQAAPKDN TWYTGGKLGW SQYQDTGSII NNDGPTHKDQ LGAGAFFGYQ ANQYLGFEMG YDWLGRMPYK GDINNGAFKA QGVQLAAKLS YPVAQDLDVY TRLGGLVWRA DAKGSFDGGL DRASGHDTGV SPLVALGAEY AWTKNWATRM EYQWVNNIGD RETVGARPDN GLLSVGVSYR FGQEDAAAPI VAPTPAPAPI VDTKRFTLKS DVLFGFNKAN LKPEGQQALD QLYAQLSSID PKDGSVVVLG FADRIGQPAP NLALSQRRAD SVRDYLVSKG IPADKITARG EGQANPVTGN TCDNVKPRAA LIECLAPDRR VEIEVKGYKE VVTQPQA
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