Gene YpsIP31758_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2539 
SymboltfoX 
ID5385064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2871071 
End bp2871706 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID640865527 
ProductDNA transformation protein tfoX 
Protein accessionYP_001401504 
Protein GI153947909 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000000000195264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TGTCAGAAAA AAGGATCGCT CAAGCACAAG TTCGTTTTGG TTTTCTGGGG 
CAGATAACAA TTCGTTCCCA ATTTGGGGGC TATGGTCTAT TGGTTAATAG CATCATGTTC 
GCTGTTGTTT CGGAAGGTGA GCTTTATTTG CGTGCTAACG ATAATATTGA GGATTTATTC 
CGCGCCAGTG GAATGGCTAA CCTTGTTTAT GCTAAACGCG GGTTACCTGT CTTGCTACGT 
TATTATCGGG TTGATACTTC ATTATGGAAT GATGGACTCA GATTACATCA TTTCGTCCGG 
CAGGCTTATG AGGGCGCGAA AATAGACGTT CTGAGTAAGA AAGGCCCAGT GGTACGGCTG 
AAGGATTTAC CTAATCTTAG CGCCAGCCTT GAACGGCTAT TATGGAAAGT GGGTATAAAG 
AATGCGACTG AATTACGCCT TGAAGGCGCT AAATGTTGCT ACTTGAAATT ACGGGCGTTA 
AGGCGCTCTC TTGGGATTAA TATTTTGCTG GCGTTGGCGG GGGCTATCAG TGGCTATCAT 
TATGCTGCTT TGCCTTTGAT GATGCGCAGT GAGCTTATCG AATGGTTTGA AAAACACATC 
CATCCAGCAA AGGCTCCATT ATATGAAACG GCATAA
 
Protein sequence
MKIMSEKRIA QAQVRFGFLG QITIRSQFGG YGLLVNSIMF AVVSEGELYL RANDNIEDLF 
RASGMANLVY AKRGLPVLLR YYRVDTSLWN DGLRLHHFVR QAYEGAKIDV LSKKGPVVRL 
KDLPNLSASL ERLLWKVGIK NATELRLEGA KCCYLKLRAL RRSLGINILL ALAGAISGYH 
YAALPLMMRS ELIEWFEKHI HPAKAPLYET A