Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2536 |
Symbol | helD |
ID | 5386749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2866107 |
End bp | 2868161 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640865524 |
Product | DNA helicase IV |
Protein accession | YP_001401501 |
Protein GI | 153948937 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000168244 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTA AAGCGACATC TTTTGGCAAA CATCTGTCTC AGCACCCCTA TAACCGGGTC CGCTTGCTGA ATGCAGGCAT CGAAGTCTGC GGTGATAAAC ATCAATACCT AATCCCTTTT AACCAACTGG TTAGTATTCA GTGTAAACGA GGTATCGTTT GGGGCGAGCT TGAATTTGAG TTGCCGCAGC AGAAAGTTGT ACGGTTGCAC GGTACTGAAT GGCAGGAAAC ACAACATTTC TATCATTACT TGCTAGGGGT ATGGCAGCAA TGGAGTGAAG AAATGAGCCA GGTTTGTGCG GAGGTGCTGC ATAAACAGGT GGAGTCAATT AAGCGAATTG AACAGCAGGA TAAATGGTTT AAACGCAGTG AATTAGGCCA GATACAAGTC ATGATCCGCG AGGCATTCAG TGCCTTACCA ATGCCAGTGG AACGCTTAGC GGCGTTTGAA TCCTGTCGAG CAGATTATGA ATGCTGCCTG CGTTGGTTAC AGCAAGGTCG TCACAGTGTT GAACGATGTA ATCAGCAATG GACAGCCCGT ATGTTGGAGG AGTATCAAGA TTTTTTCCAA AATGTAGAAA CTTCGCCCCT TAATGCCTCA CAAAGCCGGG CGGTGGTTAA CGGTGAAGAT TCAGTTTTGG TGTTAGCCGG CGCGGGTAGC GGTAAAACAT CGGTGCTGGT GGCGCGTGCG GGCTGGTTGC TACGTCGTAA TGAGGCACTA CCTGAGCAGA TTTTATTGCT GGCATTTGGT CGCCAGGCGG CCGATGAAAT GAATAGCCGT ATTAAACAAC GCTTGGGCGT GGATAGCATC CAAGCTAAAA CTTTTCATGC TCTGGCATTA CATATTATCC AGCAAGGTAG CCGCAAGACA CCGGTTATCA GCAAGCTTGA GTCTGATAGC CAGGCCAGAA GGGCGTTGTT AATTCAACAT TGGCAGCAAC AGTGTAGCGA GAAGAAAGCA CAGGCCAAAG GGTGGCGAGA GTGGCTAACT GATGAGTTGG AATGGGACGT TGCTGACGGC GATTTCTGGC AGGACAAAAG GTTGGCTGCG AGGCTGGCAA GTCGCCTTGA ACGTTGGGTA GGGTTGATGC GTATGCACGG TGGCAGTCAG GCTGAAATGA TTGAGCAAGC GAATGACGAG GTGCGTGACC TGTTTCAAAA GCGTATCCGT TTAATGGCAC CGTTGCTAAA AGCCTGGAAA ACGGCATTGA AAGATGAGGG TGCCGTCGAT TTTTCTGGGT TGATTCATCA GGCGGTTAAC TTGCTGGAGA AAGGGCGCTT TGTCAGCCCA TGGAAGCATG TTTTGGTTGA TGAGTTCCAG GATATCTCAC CACAAAGGGC GATGTTACTC GCGGCGCTGC GTAAACAGAA TAAGCAAACT TGCCTGTTTG CGGTTGGCGA TGATTGGCAG GCTATTTACC GCTTCAGTGG TGCTGAACTT TCGCTGACAA CGGCTTTTAG CGAGCATTTT GGTGAAGGTG CTGAATGTGC ACTGGATACG ACTTACCGCT TTAACGATCG GATTGGTGAT ATTGCGAACC GGTTTATTCA GCAAAACCCT TATCAACTGA AGAAACCACT TAATAGCTTG AGTAAGGGTA ATAAAAAGTC GGTCATGATT TTACCCGATG AGCAGTTGGA AGCCCTATTA GATAAATTAA GCGGCTTTGT TAAGGACGGC GAACGTATCC TAATATTGGC GCGTTACCAT CATTTACGCC CCGAAGTTTT ACAAAAAGCG GCGACGCGGT GGCCAAAGTT GACTATCGAT TTTATGACCA TCCATGCCAG CAAAGGGCAG CAGGCTGATT ATGTCATTAT CGTTGGCTTA CATGAGGGTA ATGATGGGTT CCCAGCCGCG GCGCGGGAAT CTGTACTGGA AGATGTGTTG CTACCTCCTC CCGAAGATTT CCCTGATGCT GAAGAGCGGC GTTTGCTTTA TGTCGCAATA ACGCGTGCTA AGCACCAAGT GTGGTTACTA CAAGATACGG CACGGCCTTC TATTTTTGTC TCTCAACTCA GTGAATTAGG TGCCCTGGTA CAACGTAAGC CCTAG
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Protein sequence | MELKATSFGK HLSQHPYNRV RLLNAGIEVC GDKHQYLIPF NQLVSIQCKR GIVWGELEFE LPQQKVVRLH GTEWQETQHF YHYLLGVWQQ WSEEMSQVCA EVLHKQVESI KRIEQQDKWF KRSELGQIQV MIREAFSALP MPVERLAAFE SCRADYECCL RWLQQGRHSV ERCNQQWTAR MLEEYQDFFQ NVETSPLNAS QSRAVVNGED SVLVLAGAGS GKTSVLVARA GWLLRRNEAL PEQILLLAFG RQAADEMNSR IKQRLGVDSI QAKTFHALAL HIIQQGSRKT PVISKLESDS QARRALLIQH WQQQCSEKKA QAKGWREWLT DELEWDVADG DFWQDKRLAA RLASRLERWV GLMRMHGGSQ AEMIEQANDE VRDLFQKRIR LMAPLLKAWK TALKDEGAVD FSGLIHQAVN LLEKGRFVSP WKHVLVDEFQ DISPQRAMLL AALRKQNKQT CLFAVGDDWQ AIYRFSGAEL SLTTAFSEHF GEGAECALDT TYRFNDRIGD IANRFIQQNP YQLKKPLNSL SKGNKKSVMI LPDEQLEALL DKLSGFVKDG ERILILARYH HLRPEVLQKA ATRWPKLTID FMTIHASKGQ QADYVIIVGL HEGNDGFPAA ARESVLEDVL LPPPEDFPDA EERRLLYVAI TRAKHQVWLL QDTARPSIFV SQLSELGALV QRKP
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