Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2489 |
Symbol | |
ID | 5384426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2811602 |
End bp | 2813365 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640865480 |
Product | hypothetical protein |
Protein accession | YP_001401458 |
Protein GI | 153950468 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACT TAACCCTGCG TTATTTTGAC GCTGAAATGC GCTACCTGCG TGAAGCGGGC GAAGAGTTTG CCCGCGCGCA CCCTGATCGG GCTGCCGGAT TAAATCTGGA TAAAGCCGGG GCGCGTGACC CCTATGTGGA ACGCCTGTTT GAAGGCTTTG CCTTCCTGAT GGGCCGCATG CGAGAAAAAC TGGATGATGA CCTGCCGGAG CTGACCGAAG GGTTGGTCAG CCTGCTGTGG CCGCACTACC TGCGCACTAT TCCGTCGCTT TCTATTGTGG AGTTCACCCC ACAATGGCAG GGGATGAAAG AACGCATGGG GGTGAGCAAA GGTTTTGAAG TGCTGTCCCG CCCCATTGGT GAGCGTGAAA CTCGCTGCCG CTACACCACC ACGCAGGATA TGGACTTGCT CCCGCTGACA TTGAGCCGAG CCAAATTGGA CAGTGAACCC GATGGCCGGT CGGTTATCCG GCTGCGCTTT GATTGCAGCG CGCTGGCCGA CTGGAGCCGT ATCAACCTGA GCCGCCTGCC GCTCTATTTT GATGCCGATG CGCCGCTGGC CTGCGCCCTG CATGAGGCGC TGACCCTGAA TACCGCCAAA CTCTGGATCC GTTTGCCGGG GCAGGCTGAT CGCCAGCCGC TGGACGGCCA TTTCGCGCCG CTGGGGTTCG GGGAGCAGGA TACACTGTGG CCGAAGGCCG ACAGTGCGTT CAGTGGTTAT CAGCTCTTGC TGGAGTACTT TACCTTCCGC GAAAAGTTTA TGTTTGTCGC GTTGCAGGGG CTGGATGGGA TCGAGCTGCC GGCGGAACTG CCGTGGTTTG AGATTGATGT GGTGCTGGAA AAACGCTGGC AACATGATTT TTCGTTCTCC GAAAAGAACC TGCGCCTGCA TTGTGTGCCG GTGATTAACC TGTTCCCGCT GGAATCGGAC CCACTGTCGC TCTCTTCATT ACAGACCGAA TACCTGCTGC GCCCAATGCG CATTCAGGAC GGTTATACCG AAGTGTATTC GGTGGACTCG GTGATCTCCT CGCGTCATAC CGGGCATCAG GTCTATGTCC CGTTCACCAG TTTTCGCCAT AAGGGCGGGA TGCTGCGCCA TGATGCGCCG GAATATTACT ACCATACGCG GGTCAAACGC GGGCCTTCGG GGCTGCACGA TACCTGGCTG GTGCTGGGAG GCGAGGCGTT TGATAACCAT AGCGTACCCG ATAATGAGAA TCTGTCGCTG AGCCTGACCG GCACCAACGG GCAATTACCG CGTAAAGCGC TGCAAAGCAC GGTGCTGGAT ACCGCGGTGA AATCCACCGG GGCTCAGGTT CGGGTGCGTA ATCTGTCCGC GCCGTCATTG CCGTGTTACC CACCCAACCG CGACCGTTTT CACTGGCGGG TACTGAGCCA TCTGGGCAGC AGTTTTCTGT GGATGATGGA TAACGCTGAA GTGCTGCGCG GCACGCTGGC GCTGTATGAC TGGACGGACA ACGAAATGAA CCGCCGTCGG CTGGAGGCTA TCGCCGAGGT CAAACACAGC GAGATTGAAC GCTTTGAACG GGGCTATTTG TTGCGCGGGG TGCACATTGA AATCACCCTC GACAGCAACG GCTTTACCGG CACCGGGGAT ATCTGTCTGT TCGGGGAAAT GCTCAGTCGC TTCTTTGCCC TGTATACCGA TATTCATCTG TTTAATCGCC TGACTCTGAT ACTGCAACCG ACAGGAGAAC GTTTGGAATG GGAAGAGAAT CATCAGTCCC GCCTTCCCGG CTAA
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Protein sequence | MDDLTLRYFD AEMRYLREAG EEFARAHPDR AAGLNLDKAG ARDPYVERLF EGFAFLMGRM REKLDDDLPE LTEGLVSLLW PHYLRTIPSL SIVEFTPQWQ GMKERMGVSK GFEVLSRPIG ERETRCRYTT TQDMDLLPLT LSRAKLDSEP DGRSVIRLRF DCSALADWSR INLSRLPLYF DADAPLACAL HEALTLNTAK LWIRLPGQAD RQPLDGHFAP LGFGEQDTLW PKADSAFSGY QLLLEYFTFR EKFMFVALQG LDGIELPAEL PWFEIDVVLE KRWQHDFSFS EKNLRLHCVP VINLFPLESD PLSLSSLQTE YLLRPMRIQD GYTEVYSVDS VISSRHTGHQ VYVPFTSFRH KGGMLRHDAP EYYYHTRVKR GPSGLHDTWL VLGGEAFDNH SVPDNENLSL SLTGTNGQLP RKALQSTVLD TAVKSTGAQV RVRNLSAPSL PCYPPNRDRF HWRVLSHLGS SFLWMMDNAE VLRGTLALYD WTDNEMNRRR LEAIAEVKHS EIERFERGYL LRGVHIEITL DSNGFTGTGD ICLFGEMLSR FFALYTDIHL FNRLTLILQP TGERLEWEEN HQSRLPG
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